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ORCIDPerry G. Ridge
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2020 – today
- 2023
[j11]Stephen R. Piccolo
, Paul Denny, Andrew Luxton-Reilly, Samuel H. Payne, Perry G. Ridge:
Evaluating a large language model's ability to solve programming exercises from an introductory bioinformatics course. PLoS Comput. Biol. 19(9) (2023)- [i1]Stephen R. Piccolo, Paul Denny, Andrew Luxton-Reilly, Samuel H. Payne, Perry G. Ridge:
Many bioinformatics programming tasks can be automated with ChatGPT. CoRR abs/2303.13528 (2023)
2010 – 2019
- 2019
- [j10]Justin Miller, Brandon D. Pickett, Perry G. Ridge:
JustOrthologs: a fast, accurate and user-friendly ortholog identification algorithm. Bioinform. 35(4): 546-552 (2019) - 2017
- [j9]Brandon D. Pickett, Justin Miller, Perry G. Ridge:
Kmer-SSR: a fast and exhaustive SSR search algorithm. Bioinform. 33(24): 3922-3928 (2017) - 2016
- [j8]Brandon D. Pickett, S. M. Karlinsey, C. E. Penrod, Michael J. Cormier, Mark T. W. Ebbert, Dennis K. Shiozawa, C. J. Whipple, Perry G. Ridge:
SA-SSR: a suffix array-based algorithm for exhaustive and efficient SSR discovery in large genetic sequences. Bioinform. 32(17): 2707-2709 (2016) - [j7]Mark T. W. Ebbert, Mark E. Wadsworth, Lyndsay A. Staley, Kaitlyn L. Hoyt, Brandon D. Pickett, Justin Miller, John Duce, John S. K. Kauwe, Perry G. Ridge:
Evaluating the necessity of PCR duplicate removal from next-generation sequencing data and a comparison of approaches. BMC Bioinform. 17(S-7): 239 (2016) - [j6]Paul M. Bodily, M. Stanley Fujimoto, Justin T. Page, Mark J. Clement, Mark T. W. Ebbert, Perry G. Ridge:
A novel approach for multi-SNP GWAS and its application in Alzheimer's disease. BMC Bioinform. 17(S-7): 268 (2016) - 2014
- [j5]Mark T. W. Ebbert, Mark E. Wadsworth, Kevin L. Boehme, Kaitlyn L. Hoyt, Aaron R. Sharp, Brendan D. O'Fallon, John S. K. Kauwe, Perry G. Ridge:
Variant Tool Chest: an improved tool to analyze and manipulate variant call format (VCF) files. BMC Bioinform. 15(S-7): S12 (2014) - [j4]Perry G. Ridge, Taylor J. Maxwell, Spencer J. Foutz, Matthew H. Bailey, Christopher D. Corcoran, JoAnn T. Tschanz, Maria C. Norton, Ronald G. Munger, Elizabeth O'Brien, Richard A. Kerber, Richard M. Cawthon, John S. K. Kauwe:
Mitochondrial genomic variation associated with higher mitochondrial copy number: the Cache County Study on Memory Health and Aging. BMC Bioinform. 15(S-7): S6 (2014) - [j3]Aaron R. Sharp, Perry G. Ridge, Matthew H. Bailey, Kevin L. Boehme, Maria C. Norton, JoAnn T. Tschanz, Ronald G. Munger, Christopher D. Corcoran, John S. K. Kauwe:
Population substructure in Cache County, Utah: the Cache County study. BMC Bioinform. 15(S-7): S8 (2014) - [c4]Paul M. Bodily, Mark J. Clement, Quinn Snell, M. Stanley Fujimoto, Perry G. Ridge:
Haplotype-centered mapping for improved alignments and genetic association studies. BCB 2014: 499-505 - 2013
- [j2]Perry G. Ridge, Christine Miller, Pinar Bayrak-Toydemir, D. Hunter Best, Rong Mao, Jeffrey J. Swensen, Elaine Lyon, Karl V. Voelkerding:
Cystic fibrosis testing in a referral laboratory: results and lessons from a six-year period. J. Clin. Bioinform. 3: 3 (2013) - 2010
- [c3]David K. Crockett, Perry G. Ridge:
A novel representation of HLA allele specificity and prediction algorithm for HLA class I binding. BCB 2010: 642-643 - [c2]Perry G. Ridge, David K. Crockett:
Feature selection for characterizing HLA class I peptide motif anchors. BCB 2010: 644-645
2000 – 2009
- 2007
- [j1]Hyrum Carroll, Perry G. Ridge, Mark J. Clement, Quinn Snell:
Phylogenies scores for exhaustive searches and parsimony scores searches. Int. J. Bioinform. Res. Appl. 3(4): 493-503 (2007) - 2006
- [c1]Perry G. Ridge, Hyrum Carroll, Dan Sneddon, Mark J. Clement, Quinn Snell:
Large Grain Size Stochastic Optimization Alignment. BIBE 2006: 127-134
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