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2020 – today
- 2024
[j12]Loïc Lannelongue
, Michael Inouye:
Pitfalls of machine learning models for protein-protein interaction networks. Bioinform. 40(2) (2024)- [c4]Md Sahil Hassan, Michael Inouye, Miguel Castro-Gonzalez, Ilkin Aliyev, Joshua Mack, Maisha Hafiz, Ali Akoglu:
GPU-RANC: A CUDA Accelerated Simulation Framework for Neuromorphic Architectures. NICE 2024: 1-7 - [i4]Md Sahil Hassan, Michael Inouye, Miguel Castro-Gonzalez, Ilkin Aliyev, Joshua Mack, Maisha Hafiz, Ali Akoglu:
GPU-RANC: A CUDA Accelerated Simulation Framework for Neuromorphic Architectures. CoRR abs/2404.16208 (2024) - 2023
- [j11]Elliot Sollis, Abayomi Mosaku, Ala Abid, Annalisa Buniello, Maria Cerezo, Laurent Gil, Tudor Groza, Osman Nuri Günes, Peggy Hall, James D. Hayhurst, Arwa Ibrahim, Yue Ji, Sajo John, Elizabeth Lewis, Jacqueline A. L. MacArthur, Aoife McMahon, David Osumi-Sutherland, Kalliope Panoutsopoulou, Zoë May Pendlington, Santhi Ramachandran, Raymund Stefancsik, Jonathan Stewart, Patricia L. Whetzel, Robert J. Wilson, Lucia Hindorff, Fiona Cunningham, Samuel A. Lambert, Michael Inouye, Helen E. Parkinson, Laura W. Harris:
The NHGRI-EBI GWAS Catalog: knowledgebase and deposition resource. Nucleic Acids Res. 51(D1): 977-985 (2023) - [j10]Loïc Lannelongue, Hans-Erik G. Aronson, Alex Bateman, Ewan Birney, Talia Caplan, Martin Juckes, Johanna R. McEntyre, Andrew D. Morris, Gerry Reilly, Michael Inouye:
GREENER principles for environmentally sustainable computational science. Nat. Comput. Sci. 3(6): 514-521 (2023) - 2022
- [j9]György Abrusán, David B. Ascher, Michael Inouye:
Known allosteric proteins have central roles in genetic disease. PLoS Comput. Biol. 18(2) (2022) - 2021
- [j8]Loïc Lannelongue, Jason Grealey, Alex Bateman, Michael Inouye:
Ten simple rules to make your computing more environmentally sustainable. PLoS Comput. Biol. 17(9) (2021) - [j7]Joshua Mack, Ruben Purdy, Kris Rockowitz, Michael Inouye, Edward Richter, Spencer Valancius, Nirmal Kumbhare, Md Sahil Hassan, Kaitlin Lindsay Fair, John Mixter, Ali Akoglu:
RANC: Reconfigurable Architecture for Neuromorphic Computing. IEEE Trans. Comput. Aided Des. Integr. Circuits Syst. 40(11): 2265-2278 (2021) - 2020
- [c3]Spencer Valancius, Edward Richter, Ruben Purdy, Kris Rockowitz, Michael Inouye, Joshua Mack, Nirmal Kumbhare, Kaitlin Lindsay Fair, John Mixter, Ali Akoglu:
FPGA Based Emulation Environment for Neuromorphic Architectures. IPDPS Workshops 2020: 90-97 - [i3]Spencer Valancius, Edward Richter, Ruben Purdy, Kris Rockowitz, Michael Inouye, Joshua Mack, Nirmal Kumbhare, Kaitlin Lindsay Fair, John Mixter, Ali Akoglu:
FPGA Based Emulation Environment for Neuromorphic Architectures. CoRR abs/2004.06061 (2020) - [i2]Loïc Lannelongue, Jason Grealey, Michael Inouye:
Green Algorithms: Quantifying the carbon emissions of computation. CoRR abs/2007.07610 (2020) - [i1]Joshua Mack, Ruben Purdy, Kris Rockowitz, Michael Inouye, Edward Richter, Spencer Valancius, Nirmal Kumbhare, Md Sahil Hassan, Kaitlin Lindsay Fair, John Mixter, Ali Akoglu:
RANC: Reconfigurable Architecture for Neuromorphic Computing. CoRR abs/2011.00624 (2020)
2010 – 2019
- 2019
- [j6]Stephen C. Watts, Scott C. Ritchie, Michael Inouye, Kathryn E. Holt:
FastSpar: rapid and scalable correlation estimation for compositional data. Bioinform. 35(6): 1064-1066 (2019) - 2017
- [j5]Gad Abraham, Yixuan Qiu, Michael Inouye:
FlashPCA2: principal component analysis of Biobank-scale genotype datasets. Bioinform. 33(17): 2776-2778 (2017) - 2015
- [j4]Benjamin Goudey, Mani Abedini, John L. Hopper, Michael Inouye, Enes Makalic, Daniel F. Schmidt, John Wagner, Zeyu Zhou, Justin Zobel, Matthias Reumann:
High performance computing enabling exhaustive analysis of higher order single nucleotide polymorphism interaction in Genome Wide Association Studies. Health Inf. Sci. Syst. 3(1) (2015) - 2012
- [j3]Gad Abraham, Adam Kowalczyk, Justin Zobel, Michael Inouye:
SparSNP: Fast and memory-efficient analysis of all SNPs for phenotype prediction. BMC Bioinform. 13: 88 (2012) - [c2]Matthias Reumann, Enes Makalic, Benjamin W. Goudey, Michael Inouye, Adrian Bickerstaffe, Minh Bui, Daniel J. Park, Miroslaw K. Kapuscinski, Daniel F. Schmidt, Zeyu Zhou, Guoqi Q. Qian, Justin Zobel, John Wagner, John L. Hopper:
Supercomputing enabling exhaustive statistical analysis of genome wide association study data: Preliminary results. EMBC 2012: 1258-1261 - 2011
- [j2]Benjamin Goudey, Qiao Wang, Dave Rawlinson, Armita Zarnegar, Eder Kikianty, John Markham, Geoff MacIntyre, Gad Abraham, Linda Stern, Michael Inouye, Izhak Haviv, Adam Kowalczyk:
Replication of epistatic DNA loci in two case-control GWAS studies using OPE algorithm. BMC Bioinform. 12(S-11): A5 (2011) - [c1]Philip C. Church, Andrzej Goscinski, Kathryn E. Holt, Michael Inouye, Amol Ghoting, Konstantin Makarychev, Matthias Reumann:
Design of multiple sequence alignment algorithms on parallel, distributed memory supercomputers. EMBC 2011: 924-927
2000 – 2009
- 2007
- [j1]Yik Y. Teo, Michael Inouye, Kerrin S. Small, Rhian Gwilliam, Panagiotis Deloukas, Dominic Kwiatkowski, Taane G. Clark:
A genotype calling algorithm for the Illumina BeadArray platform. Bioinform. 23(20): 2741-2746 (2007)
Coauthor Index
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