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Mingzhou Song 0001
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- affiliation: New Mexico State University, Department of Computer Science, Las Cruces, NM, USA
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2020 – today
- 2023
- [j16]Yinong Chen
, Tathagata Debnath
, Andrew Cai
, Mingzhou Song
:
Circular Silhouette and a Fast Algorithm. IEEE Trans. Pattern Anal. Mach. Intell. 45(11): 14038-14044 (2023) - 2022
- [j15]Sajal Kumar
, Mingzhou Song
:
Overcoming biases in causal inference of molecular interactions. Bioinform. 38(10): 2818-2825 (2022) - [j14]Lovemore Tenha
, Mingzhou Song
:
Statistical evidence for the presence of trajectory in single-cell data. BMC Bioinform. 23-S(8): 340 (2022) - [j13]Lovemore Tenha
, Mingzhou Song
:
Inference of trajectory presence by tree dimension and subset specificity by subtree cover. PLoS Comput. Biol. 18(2) (2022) - 2021
- [j12]Ruby Sharma, Sajal Kumar
, Mingzhou Song
:
Fundamental gene network rewiring at the second order within and across mammalian systems. Bioinform. 37(19): 3293-3301 (2021) - [j11]Tathagata Debnath
, Mingzhou Song
:
Fast Optimal Circular Clustering and Applications on Round Genomes. IEEE ACM Trans. Comput. Biol. Bioinform. 18(6): 2061-2071 (2021) - 2020
- [j10]Mingzhou Song
, Hua Zhong
:
Efficient weighted univariate clustering maps outstanding dysregulated genomic zones in human cancers. Bioinform. 36(20): 5027-5036 (2020) - [c18]Ruby Sharma, Xuye Luo
, Sajal Kumar
, Mingzhou Song:
Three Co-expression Pattern Types across Microbial Transcriptional Networks of Plankton in Two Oceanic Waters. BCB 2020: 14:1-14:10 - [c17]Jiandong Wang, Sajal Kumar
, Mingzhou Song:
Joint Grid Discretization for Biological Pattern Discovery. BCB 2020: 57:1-57:10 - [c16]Hien Nguyen
, Hua Zhong
, Mingzhou Song:
Optimality, Accuracy, and Efficiency of an Exact Functional Test. IJCAI 2020: 2683-2689
2010 – 2019
- 2019
- [j9]Hua Zhong
, Mingzhou Song
:
A Fast Exact Functional Test for Directional Association and Cancer Biology Applications. IEEE ACM Trans. Comput. Biol. Bioinform. 16(3): 818-826 (2019) - [c15]Eliska Dvoráková, Sajal Kumar
, Jirí Kléma, Filip Zelezný, Karel Drbal, Mingzhou Song
:
Evaluating Model-free Directional Dependency Methods on Single-cell RNA Sequencing Data with Severe Dropout. ICBRA 2019: 55-62 - 2018
- [c14]Sajal Kumar
, Hua Zhong
, Ruby Sharma, Yiyi Li, Mingzhou Song
:
Scrutinizing functional interaction networks from RNA-binding proteins to their targets in cancer. BIBM 2018: 185-190 - 2017
- [j8]Ruby Sharma, Sajal Kumar
, Hua Zhong
, Mingzhou Song:
Simulating Noisy, Nonparametric, and Multivariate Discrete Patterns. R J. 9(2): 366 (2017) - 2011
- [j7]Zhengyu Ouyang, Mingzhou Song
, Robert Güth, Thomas Ha, Matt Larouche, Daniel Goldowitz
:
Conserved and differential gene interactions in dynamical biological systems. Bioinform. 27(20): 2851-2858 (2011) - [j6]Hien Nguyen
, Mingzhou Song
:
Integrated cellular and gene interaction modelling of pattern formation. Int. J. Comput. Biol. Drug Des. 4(4): 361-372 (2011) - [j5]Haizhou Wang, Mingzhou Song:
Ckmeans.1d.dp: Optimal k-means Clustering in One Dimension by Dynamic Programming. R J. 3(2): 29 (2011) - 2010
- [j4]Mingzhou (Joe) Song
, Robert M. Haralick, Stéphane Boissinot
:
Efficient and exact maximum likelihood quantisation of genomic features using dynamic programming. Int. J. Data Min. Bioinform. 4(2): 123-141 (2010) - [c13]Hien Nguyen
, Mingzhou Song
:
Integrated cellular and gene interaction model for cell migration in embryonic development. BIBM Workshops 2010: 229-233
2000 – 2009
- 2009
- [j3]Mingzhou (Joe) Song
, Chris K. Lewis, Eric R. Lance, Elissa J. Chesler, Roumyana Kirova Yordanova, Michael A. Langston, Kerrie H. Lodowski, Susan E. Bergeson:
Reconstructing Generalized Logical Networks of Transcriptional Regulation in Mouse Brain from Temporal Gene Expression Data. EURASIP J. Bioinform. Syst. Biol. 2009 (2009) - [c12]Mingzhou Song, Chung-Chien Hong, Yang Zhang, Laura Buttitta, Bruce Edgar:
Comparative Generalized Logic Modeling Reveals Differential Gene Interactions during Cell Cycle Exit in Drosophila Wing Development. GCB 2009: 143-152 - [c11]Zhengyu Ouyang, Mingzhou Song:
Comparative Identification of Differential Interactions from Trajectories of Dynamic Biological Networks. GCB 2009: 163-172 - [c10]Zhengyu Ouyang, Mingzhou Song
:
Statistical Analysis of Discrete Dynamical System Models for Biological Networks. IJCBS 2009: 472-478 - 2008
- [c9]Mingzhou (Joe) Song
, Lin Zhang:
Comparison of Cluster Representations from Partial Second- to Full Fourth-Order Cross Moments for Data Stream Clustering. ICDM 2008: 560-569 - 2007
- [c8]Mingzhou (Joe) Song
, Robert M. Haralick, Stéphane Boissinot:
Maximum Likelihood Quantization of Genomic Features Using Dynamic Programming. ICMLA 2007: 547-553 - 2006
- [j2]Mingzhou (Joe) Song
, Hongbin Wang:
A spike sorting framework using nonparametric detection and incremental clustering. Neurocomputing 69(10-12): 1380-1384 (2006) - [c7]Mingzhou Song, Hongbin Wang:
Detecting Low Complexity Clusters by Skewness and Kurtosis in Data Stream Clustering. AI&M 2006 - [c6]Mingzhou (Joe) Song, Z. Lewis Liu:
A Linear Discrete Dynamic System Model for Temporal Gene Interaction and Regulatory Network Influence in Response to Bioethanol Conversion Inhibitor HMF for Ethanologenic Yeast. Systems Biology and Computational Proteomics 2006: 77-95 - 2003
- [c5]Mingzhou Song, Stéphane Boissinot
, Robert M. Haralick, Ihsin T. Phillips:
Estimating Recombination Rate Distribution by Optimal Quantization. CSB 2003: 403-406 - 2002
- [j1]Mingzhou Song
, Robert M. Haralick, Florence H. Sheehan, Richard K. Johnson:
Integrated Surface Optimization for 3-D Freehand Echocardiography. IEEE Trans. Medical Imaging 21(9): 1077-1090 (2002) - [c4]Mingzhou Song, Robert M. Haralick:
Optimally Quantized and Smoothed Histograms. JCIS 2002: 894-897 - 2000
- [c3]Mingzhou Song
, Robert M. Haralick, Florence H. Sheehan:
Ultrasound Imaging Simulation and Echocardiographic Image Synthesis. ICIP 2000: 420-423 - [c2]Mingzhou Song
, Aiwen Guo, Robert M. Haralick:
Single View Computer Vision in Polyhedral World: Geometric Inference and Performance Characterization. ICPR 2000: 1766-1769 - [c1]Selim Aksoy, Ming Ye, Michael L. Schauf, Mingzhou Song
, Yalin Wang, Robert M. Haralick, Jim R. Parker, Juraj Pivovarov, Dominik Royko, Changming Sun, Gunnar Farnebäck:
Algorithm Performance Contest. ICPR 2000: 4870-4876
Coauthor Index

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