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2020 – today
- 2024
[j9]Kristofer Sandås
, Jacob Lewerentz, Edvin Karlsson, Linda Karlsson, David Sundell, Kotryna Simonyté-Sjödin, Andreas Sjödin:
Nanometa Live: a user-friendly application for real-time metagenomic data analysis and pathogen identification. Bioinform. 40(3) (2024)- [j8]Luiz Irber, N. Tessa Pierce-Ward, Mohamed Abuelanin, Harriet Alexander, Abhishek Anant, Keya Barve, Colton Baumler, Olga B. Botvinnik, Phillip Brooks, Daniel Dsouza, Gautier Laurent, Mahmudur Rahman Hera, Hannah Eve Houts, Lisa K. Johnson, Fabian Klötzl, David Koslicki, Marisa Lim, Ricky Lim, Bradley Nelson, Ivan Ogasawara, Taylor Reiter, Camille Scott, Andreas Sjödin, Daniel S. Standage, S. Joshua Swamidass, Connor Tiffany, Pranathi Vemuri, Erik Young, C. Titus Brown:
sourmash v4: A multitool to quickly search, compare, and analyze genomic and metagenomic data sets. J. Open Source Softw. 9(98): 6830 (2024) - 2021
- [j7]David Sundell, Caroline Öhrman, Daniel Svensson, Edvin Karlsson, Björn Brindefalk, Kerstin Myrtennäs, Jon Ahlinder, Markus H. Antwerpen, Mathias C. Walter, Mats Forsman, Per Stenberg, Andreas Sjödin:
FlexTaxD: flexible modification of taxonomy databases for improved sequence classification. Bioinform. 37(21): 3932-3933 (2021)
2010 – 2019
- 2019
- [j6]Daniel Svensson, Rickard Sjögren, David Sundell, Andreas Sjödin, Johan Trygg:
doepipeline: a systematic approach to optimizing multi-level and multi-step data processing workflows. BMC Bioinform. 20(1): 498:1-498:13 (2019) - 2014
- [j5]Adrian Lärkeryd, Kerstin Myrtennäs, Edvin Karlsson, Chinmay Kumar Dwibedi, Mats Forsman, Pär Larsson, Anders Johansson, Andreas Sjödin:
CanSNPer: a hierarchical genotype classifier of clonal pathogens. Bioinform. 30(12): 1762-1764 (2014) - 2012
- [j4]Jing-Woei Li, Keith Robison, Marcel Martin, Andreas Sjödin, Björn Usadel, Matthew Young, Eric C. Olivares, Dan M. Bolser:
The SEQanswers wiki: a wiki database of tools for high-throughput sequencing analysis. Nucleic Acids Res. 40(Database-Issue): 1313-1317 (2012)
2000 – 2009
- 2007
- [j3]Max Bylesjö, Daniel Eriksson, Andreas Sjödin, Stefan Jansson, Thomas Moritz, Johan Trygg:
Orthogonal projections to latent structures as a strategy for microarray data normalization. BMC Bioinform. 8 (2007) - 2006
- [j2]Max Bylesjö, Andreas Sjödin, Daniel Eriksson, Henrik Antti, Thomas Moritz, Stefan Jansson, Johan Trygg:
MASQOT-GUI: spot quality assessment for the two-channel microarray platform. Bioinform. 22(20): 2554-2555 (2006) - 2005
- [j1]Max Bylesjö, Daniel Eriksson, Andreas Sjödin, Michael Sjöström, Stefan Jansson, Henrik Antti, Johan Trygg:
MASQOT: a method for cDNA microarray spot quality control. BMC Bioinform. 6: 250 (2005)
Coauthor Index
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