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Avanti Shrikumar
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2020 – today
- 2022
- [j2]Surag Nair, Avanti Shrikumar, Jacob M. Schreiber, Anshul Kundaje:
fastISM: performantin silicosaturation mutagenesis for convolutional neural networks. Bioinform. 38(9): 2397-2403 (2022) - 2021
- [c6]Hannah Zhou, Avanti Shrikumar, Anshul Kundaje:
Towards a Better Understanding of Reverse-Complement Equivariance for Deep Learning Models in Genomics. MLBC 2021: 1-33 - [c5]Eva Prakash
, Avanti Shrikumar, Anshul Kundaje:
Towards More Realistic Simulated Datasets for Benchmarking Deep Learning Models in Regulatory Genomics. MLBC 2021: 58-77 - 2020
- [b1]Avanti Shrikumar:
Interpretable machine learning for scientific discovery in regulatory genomics. Stanford University, USA, 2020 - [c4]Amr Alexandari, Anshul Kundaje, Avanti Shrikumar:
Maximum Likelihood with Bias-Corrected Calibration is Hard-To-Beat at Label Shift Adaptation. ICML 2020: 222-232 - [c3]Alex Tseng, Avanti Shrikumar, Anshul Kundaje:
Fourier-transform-based attribution priors improve the interpretability and stability of deep learning models for genomics. NeurIPS 2020
2010 – 2019
- 2019
- [j1]Avanti Shrikumar, Eva Prakash
, Anshul Kundaje
:
GkmExplain: fast and accurate interpretation of nonlinear gapped k-mer SVMs. Bioinform. 35(14): i173-i182 (2019) - [c2]Avanti Shrikumar:
Suggested Best Practices for Interpreting Deep Learning Models via Input-Level Importance Scores. AAAI Spring Symposium: Interpretable AI for Well-being 2019 - [i6]Avanti Shrikumar, Anshul Kundaje
:
Calibration with Bias-Corrected Temperature Scaling Improves Domain Adaptation Under Label Shift in Modern Neural Networks. CoRR abs/1901.06852 (2019) - 2018
- [i5]Amr Alexandari, Avanti Shrikumar, Anshul Kundaje
:
Learning to Abstain via Curve Optimization. CoRR abs/1802.07024 (2018) - [i4]Avanti Shrikumar, Jocelin Su, Anshul Kundaje:
Computationally Efficient Measures of Internal Neuron Importance. CoRR abs/1807.09946 (2018) - [i3]Avanti Shrikumar, Katherine Tian, Anna Shcherbina, Ziga Avsec, Abhimanyu Banerjee, Mahfuza Sharmin, Surag Nair, Anshul Kundaje
:
TF-MoDISco v0.4.4.2-alpha: Technical Note. CoRR abs/1811.00416 (2018) - 2017
- [c1]Avanti Shrikumar, Peyton Greenside, Anshul Kundaje:
Learning Important Features Through Propagating Activation Differences. ICML 2017: 3145-3153 - [i2]Avanti Shrikumar, Peyton Greenside, Anshul Kundaje
:
Learning Important Features Through Propagating Activation Differences. CoRR abs/1704.02685 (2017) - 2016
- [i1]Avanti Shrikumar, Peyton Greenside, Anna Shcherbina, Anshul Kundaje:
Not Just a Black Box: Learning Important Features Through Propagating Activation Differences. CoRR abs/1605.01713 (2016)
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