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Skip-SCSE Multi-scale Attention and Co-learning Method for Oropharyngeal Tumor Segmentation on Multi-modal PET-CT Images

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Head and Neck Tumor Segmentation and Outcome Prediction (HECKTOR 2021)

Abstract

One of the primary treatment options for head and neck cancer is (chemo)radiation. Accurate delineation of the contour of the tumors is of great importance in the successful treatment of the tumor and in the prediction of patient outcomes. With this paper we take part in the HECKTOR 2021 challenge and we propose our methods for automatic tumor segmentation on PET and CT images of oropharyngeal cancer patients. To achieve this goal, we investigated different deep learning methods with the purpose of highlighting relevant image and modality related features, to refine the contour of the primary tumor. More specifically, we tested a Co-learning method [1] and a 3D Skip Spatial and Channel Squeeze and Excitation Multi-Scale Attention method (Skip-scSE-M), on the challenge dataset. The best results achieved on the test set were 0.762 mean Dice Similarity Score and 3.143 median of the Hausdorf Distance at 95\(\%\).

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Acknowledgement

We would like to thank the Center for Information Technology of the University of Groningen for their support and for providing access to the Peregrine high performance computing cluster.

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Correspondence to Alessia De Biase .

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De Biase, A. et al. (2022). Skip-SCSE Multi-scale Attention and Co-learning Method for Oropharyngeal Tumor Segmentation on Multi-modal PET-CT Images. In: Andrearczyk, V., Oreiller, V., Hatt, M., Depeursinge, A. (eds) Head and Neck Tumor Segmentation and Outcome Prediction. HECKTOR 2021. Lecture Notes in Computer Science, vol 13209. Springer, Cham. https://doi.org/10.1007/978-3-030-98253-9_10

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  • DOI: https://doi.org/10.1007/978-3-030-98253-9_10

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  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-030-98252-2

  • Online ISBN: 978-3-030-98253-9

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