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Commits on Dec 9, 2014

• Running update_index.py

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• Merge pull request #2 from josemduarte/master

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• Update asa.md

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• Update asa.md

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• Adding asa chapter

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• Update README.md

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• Update crystal-contacts.md

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• Linking to new chapters

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Commits on Oct 23, 2014

• Updating Footer links

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Commits on Oct 21, 2014

• fixing typo in link

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• improving documentation according to biojava/biojava#191

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Commits on Oct 16, 2014

• Update README.md

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• Update README.md

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• Update README.md

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• Update alignment.md

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• Update alignment.md

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• Update alignment.md

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• Update alignment.md

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• Fixing Jmol capitalization

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• Adding Command-line tools section

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• Added database search to structure alignment chapter

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Commits on Oct 10, 2014

• Adding addition alignment algorithms & code examples

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Commits on Oct 8, 2014

• Executing bin/update_index.py for the first time.

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• Small tweeks to update_index.py

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• Adding bin/update_index.py script.

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• Improving descriptions of alignment algorithms

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Commits on Aug 28, 2014

• Merge pull request #1 from josemduarte/master

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• Update contact-map.md

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• New tutorial on contact maps

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• Update crystal-contacts.md

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• Update crystal-contacts.md

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