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fixing merge conflicts
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‎.gitignore

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*.gem
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*.swp
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*~
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.DS_Store
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.analysis
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.bundle/
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.byebug_history
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.jekyll-metadata
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.ruby-gemset
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.ruby-version
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.sass-cache
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/test/source/file_name.txt
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/vendor
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Gemfile.lock
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_site/
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bbin/
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coverage
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gh-pages/
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pkg/
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site/_site/
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test/dest
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tmp/*

‎_wikis/BioJava:CookBook3:MSA.md

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title: BioJava:CookBook3:MSA
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layout: default
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How to create a Multiple Sequence Alignment in BioJava

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