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updating to new API
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wiki/BioJava:CookBook:PDB:datamodel.md

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BioJava provides a flexible data structure for managing protein
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structural data. The
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[Structure](http://www.biojava.org/docs/api/org/biojava/bio/structure/Structure.html)
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[Structure](http://www.biojava.org/docs/api/org/biojava/nbio/structure/Structure.html)
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class is the main container.
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A Structure has a hierarchy of sub-objects:

wiki/BioJava:CookBook:PDB:datamodel.mediawiki

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== The main hierarchy ==
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BioJava provides a flexible data structure for managing protein structural data. The [http://www.biojava.org/docs/api/org/biojava/bio/structure/Structure.html Structure] class is the main container.
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BioJava provides a flexible data structure for managing protein structural data. The [http://www.biojava.org/docs/api/org/biojava/nbio/structure/Structure.html Structure] class is the main container.
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A Structure has a hierarchy of sub-objects:
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