ENVI Tutorial:

Using ASTER Data with the

FLAASH Module














Table of Contents
OVERVIEW OF THIS TUTORIAL..................................................................................................................................... 2
INTRODUCTION ....................................................................................................................................................... 2
PREPARE ASTER DATA ............................................................................................................................................. 3
Georeference Data ............................................................................................................................................ 3
Combine VNIR and SWIR Data ........................................................................................................................... 5
Convert Interleave ............................................................................................................................................ 6
ENTER FLAASH PARAMETERS ..................................................................................................................................... 7
Scene and Sensor Information............................................................................................................................ 7
Select Atmospheric Model Settings...................................................................................................................... 9
Select Aerosol Model Settings............................................................................................................................. 9
Run FLAASH ................................................................................................................................................... 11

Tutorial: Using ASTER Data with the FLAASH Module
Overview of This Tutorial
This tutorial describes how to prepare ASTER Level 1A data for input into the Fast Line-of-sight Atmospheric Analysis of
Spectral Hypercubes (FLAASH) module. You will import a sample ASTER Level 1A data set from south-central Colorado
into FLAASH and learn how to select appropriate parameters for FLAASH, based on the characteristics of the scene.

Because ASTER Level 1A bands are not coregistered, you cannot directly input the VNIR or SWIR data sets into FLAASH.
This tutorial demonstrates how to georeference the data and how to use ENVI's Layer Stacking tool to combine the visible
near-infrared (VNIR) and shortwave infrared (SWIR) bands into a single data set to input into FLAASH. If you only want
to process one data set (for example, VNIR only), you do not need to perform Layer Stacking.

Files Used in This Tutorial
CD-ROM: Tutorial Data CD #3
Path: envi dat a\ ast er

File Description
AST_L1A. hdf
ASTER Level 1A data set in HDF format, south-central Colorado
AST_L1A. hdf . met
HDF global and local metadata for the above file

Introduction
The FLAASH module is a first-principles atmospheric correction modeling tool for retrieving spectral reflectance from
hyperspectral and multispectral radiance images. With FLAASH, you can accurately compensate for atmospheric effects.
FLAASH corrects wavelengths in the visible through near-infrared and short-wave infrared regions, up to 2.5 m. Unlike
many other atmospheric correction programs that interpolate radiation transfer properties from a pre-calculated database
of modeling results, FLAASH incorporates the MODTRAN4 radiation transfer code.

FLAASH also includes the following features:

Correction for the adjacency effect (pixel mixing due to scattering of surface-reflected radiance)

An option to compute a scene-average visibility (aerosol/haze amount). FLAASH uses the most advanced
techniques for handling particularly stressing atmospheric conditions, such as the presence of clouds.

Cirrus and opaque cloud classification map

Adjustable spectral polishing for artifact suppression

FLAASH supports hyperspectral sensors (such as HyMAP, AVIRIS, HYDICE, HYPERION, Probe-1, CASI, and AISA) and
multispectral sensors (such as Landsat, SPOT, IRS, and ASTER). Water vapor and aerosol retrieval are only possible when
the image contains bands in appropriate wavelength positions.

In addition, FLAASH can correct images collected in either vertical (nadir) or slant-viewing geometries. FLAASH was
developed by Spectral Sciences, Inc.
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ENVI Tutorial: Using ASTER Data with the FLAASH Module
Tutorial: Using ASTER Data with the FLAASH Module
Prepare ASTER Data
1. From the ENVI main menu bar, select File Open External File EOS ASTER. The Enter ASTER Filenames
dialog appears.

2. Navigate to envi dat a\ ast er and select AST_L1A. hdf . Click
Open. Four groups of data appear in the Available Bands List: two
groups of visible near-infrared (VNIR) data, one group of
shortwave infrared (SWIR) data, and one group of thermal
infrared (TIR) data.

ENVI (4.2 and later) automatically calibrates Level 1A data to
radiance based on information on the HDF attributes. The units of
the output ASTER radiance are W/(m
2
m sr).
Coregister Data
The Georeference ASTER tool is used to coregister the different ASTER
bands, a step that is required before the data can be atmospherically
corrected using FLAASH.

Since the FLAASH model is only applicable to bands between 0.35 m and
2.5 m, do not use the TIR bands. Also, In FLAASH, all of the bands that
you simultaneously correct in the same input image must have the same
viewing geometry. Since Band 3B is a backward-viewing band, do not use
this band. (You can correct Band 3B separately in FLAASH if necessary.)

1. From the ENVI main menu bar, select Map Georeference
ASTER Georeference Data. The Input ASTER Image dialog
appears.

2. The Input ASTER Image dialog lists four files with the same name. Click the first file in the list; this is the VNIR
data set with three bands. Verify that the wavelengths range from 0.556 m to 0.807 m. Click OK. The
Georeference ASTER Data dialog appears.

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ENVI Tutorial: Using ASTER Data with the FLAASH Module
Tutorial: Using ASTER Data with the FLAASH Module


3. In the list of projections, select Geographic Lat/ Lon. Accept the default values for the other fields. Note: you
can select other projections, but you should use the same projection for the VNIR and SWIR data sets.

Note: you are not required to enter an output GCP filename. If you want to keep your GCPs, then you can enter a
filename in the field provided.

4. Click OK. The Registration Parameters dialog appears.

5. Accept the default values for all fields, and choose Output Result to File.

6. In the Enter Output Filename field, type vni r _geor ef . Click OK. The Image Registration status dialog
appears during processing.

7. Repeat Steps 1-5 for the SWIR data set. In the Input ASTER Image dialog, select the third AST_L1A file in the
list. (Verify the wavelengths range from 1.656 to 2.4.) In the Registration Parameters dialog, enter an output
filename of swi r _geor ef .

8. The georeferenced VNIR and SWIR bands now appear in the Available Bands List. Their band names are
preceded with "Warp."

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ENVI Tutorial: Using ASTER Data with the FLAASH Module
Tutorial: Using ASTER Data with the FLAASH Module
Combine VNIR and SWIR Data
The next step is to combine the georeferenced VNIR and SWIR data sets using ENVI's Layer Stacking tool, and to
resample the SWIR data set to 15 m resolution to match the resolution of the VNIR data set.

1. From the ENVI main menu bar, select Basic Tools Layer Stacking. The Layer Stacking Parameters dialog
appears.

2. Click Import File. The Layer Stacking Input File dialog appears.

3. Select vni r _geor ef and click OK.

4. Click Import File again. The Layer Stacking Input File dialog appears.

5. Select swi r _geor ef and click OK.

6. Make sure vni r _geor ef is the top file. (Use the Reorder Files button and drag the filename to the top, if
necessary, to change the order).

7. Ensure that the Inclusive radio button is selected.

8. Ensure that the Output Map Projection is Geographic Lat/ Lon.

9. Accept the default values for X/ Y Pixel Size and Resampling.

10. In the Enter Output Filename field, type ast er _vni r _swi r , and click OK. After processing is complete, the
combined data set appears in the Available Bands List. Band names are preceded with "Layer."


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ENVI Tutorial: Using ASTER Data with the FLAASH Module
Tutorial: Using ASTER Data with the FLAASH Module
Convert Interleave
FLAASH requires input files to be in BIL or BIP interleave.

1. From the ENVI main menu bar, select Basic Tools Convert Data (BSQ, BIL, BIP). The Convert File Input
File dialog appears.

2. Select the combined VNIR/SWIR data set (ast er _vni r _swi r ) and click OK. The Convert File Parameters
dialog appears.

3. Select the BIL radio button. Ensure the Convert In Place toggle button is set to No.

4. In the Enter Output Filename field, type ast er _BI L and click OK. The ASTER data are now ready for input
into FLAASH.



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ENVI Tutorial: Using ASTER Data with the FLAASH Module
Tutorial: Using ASTER Data with the FLAASH Module
Enter FLAASH Parameters
1. From the ENVI main menu bar, select Spectral FLAASH. The FLAASH Atmospheric Correction Model Input
Parameters dialog appears.

2. Click Input Radiance Image. The FLAASH Input File dialog appears.

3. Select ast er _BI L and click OK. The Radiance Scale Factors dialog appears. The ASTER radiance units are
W/(m
2
m sr). FLAASH requires input radiance units of W/( cm
2
nm sr).

4. Click Use single scale factor for all bands, and enter 10.0 for the Single scale factor. Click OK.

5. In the FLAASH dialog, click Output Reflectance File. The Select Output File dialog appears. Navigate to a
directory where you want to save the output reflectance file, and specify an output filename. Click Open.

6. Click Output Directory for FLAASH Files. The Browse for Folder dialog appears. Navigate to a directory where
you want to save the output files. Click OK.

7. In the Rootname for FLAASH Files field, enter a prefix to add to each FLAASH file produced during a single
session. Do not include a directory path. The root name is the prefix appended to the output FLAASH filenames.
ENVI automatically adds an underscore character to the rootname.
Scene and Sensor Information
These fields help FLAASH determine where the sun was in the sky and the path of sunlight through the atmosphere to
the ground and back to the sensor.

1. Click the Sensor Type button and select Multispectral ASTER. The Sensor Altitude (km) value
automatically changes to 705.000.

2. In the Pixel Size (m) field, enter 15.0.

3. The Ground Elevation (km) field is the average scene elevation in kilometers above sea level. You would
normally research this prior to entering scene and sensor information for FLAASH. According to a DEM of this
region, the average elevation is 2537 m (2.537 km). Enter a value of 2.537.

If you are unsure of the values to enter for Scene Center Location, Flight Date, and Flight Time GMT (if
you are unfamiliar with the scene), you can locate them in the HDF metadata that accompany the ASTER file.

4. From the ENVI main menu bar, select Basic Tools Preprocessing Data-Specific Utilities View HDF
Global Attributes. The Select Input HDF Filenames dialog appears.

5. Navigate to envi dat a\ ASTER and select AST_L1A. hdf . Click Open. The Global Attributes dialog appears. Note
that the only way to browse the metadata is to scroll; you cannot search for specific fields. Saving the metadata
to an ASCII file and opening it in a text editor will allow you to search specific field names.

6. From the Global Attributes dialog menu bar, select File Save Text to ASCII. The Output Report Filename
dialog appears. Navigate to your output directory and select an output filename. Click OK.

7. Close the Global Attributes dialog. Open the ASCII metadata file in a text editor.

8. Search for "SCENECENTER" in the metadata. The latitude of the scene center is 38.290529 degrees, and the
longitude is -105.637035 degrees. In the FLAASH dialog, click the DD <-> DMS toggle button. Enter these
values in the Lat and Lon fields of the FLAASH dialog, respectively. Be sure to include the minus (-) sign to
indicate the Western hemisphere.
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ENVI Tutorial: Using ASTER Data with the FLAASH Module
Tutorial: Using ASTER Data with the FLAASH Module






9. Search for "SINGLEDATETIME" in the metadata. This field lists the day and time of data acquisition for the data
file. The date is 20000601, and the time of day is 181651033000Z. Enter J une 1, 2000 in the Flight Date field,
and enter 18:16:51 GMT in the Flight Time GMT (HH:MM:SS) field.



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ENVI Tutorial: Using ASTER Data with the FLAASH Module
Tutorial: Using ASTER Data with the FLAASH Module
Select Atmospheric Model Settings
Use the Atmospheric Model drop-down list to choose one of the standard MODTRAN model atmospheres. For the best
results, select a model whose standard column water vapor amount is similar to, or somewhat greater than, that
expected for the scene. The following table lists the standard column water vapor amounts (from sea level to space) for
each model atmosphere:

Model Atmosphere
Water Vapor
(std atm-cm)
Water Vapor
(g/ cm
2
)
Surface Air
Temperature
Sub-Arctic Winter (SAW) 518 0.42 -16 C or 3 F
Mid-Latitude Winter (MLW) 1060 0.85 -1 C or 30 F
U.S. Standard (US) 1762 1.42 15 C or 59 F
Sub-Arctic Summer (SAS) 2589 2.08 14 C or 57 F
Mid-Latitude Summer (MLS) 3636 2.92 21 C or 70 F
Tropical (T) 5119 4.11 27 C or 80 F


1. The ASTER scene used in this tutorial is in south-central Colorado, so select U.S. Standard from the
Atmospheric Model drop-down list.

2. The Water Retrieval toggle button is greyed out because this is not an option with ASTER data. You will use a
constant column water vapor amount for all pixels in the image. Leave the default value of 1.0 in the Water
Column Multiplier field.
Select Aerosol Model Settings
The Aerosol Model drop-down list has the following options. The choice of model is not critical if the visibility is high (for
example, greater than 40 km).

Rural Represents aerosols in areas not strongly affected by urban or industrial sources. The particle
sizes are a blend of two distributions: one large and one small.

Urban A mixture of 80% rural aerosol with 20% soot-like aerosols, appropriate for high-density
urban/industrial areas.

Maritime Represents the boundary layer over oceans, or continents under a prevailing wind from
the ocean. It is composed of two components, one from sea spray and another from rural continental
aerosol (that omits the largest particles).

Tropospheric Applies to calm, clear (visibility greater than 40 km) conditions over land and
consists of the small-particle component of the rural model.

1. From the Aerosol Model drop-down list, select Rural. This particular ASTER scene is centered in a mountainous
area that is not strongly affected by urban or industrial sources.

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ENVI Tutorial: Using ASTER Data with the FLAASH Module
Tutorial: Using ASTER Data with the FLAASH Module
2. From the Aerosol Retrieval drop-down list, select None. It is not recommended to retrieve the visibility
(aerosol) with ASTER data. While ASTER bands cover the region required for the dark-land pixel-retrieval method,
the bandwidth for Band 2 is fairly wide (60 nm) and will likely include the vegetation red edge, which could
significantly bias the visibility estimate.

3. The Initial Visibility (km) value is assumed for the atmospheric correction if the aerosol is not being retrieved.
The following table lists approximate values based on weather conditions:

Weather Condition Scene Visibility
Clear 40 to 100 km
Moderate Haze 20 to 30 km
Thick Haze 15 km or less


Leave the default value of 40.00 for Initial Visibility (km).

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ENVI Tutorial: Using ASTER Data with the FLAASH Module
Tutorial: Using ASTER Data with the FLAASH Module
Run FLAASH
The FLAASH Atmospheric Correction Model Input Parameters dialog should similar to the following:



1. The Multispectral Settings button is only used to select specific bands for water and aerosol retrieval. Since
you are not retrieving any of these with ASTER data, you do not need to click Multispectral Settings.

2. For this tutorial, you will not use the Advanced Settings, Save, or Restore buttons.

3. In the FLAASH Atmospheric Model Input Parameters dialog, click Apply to begin the FLAASH processing. You
may cancel the processing at any point, but be aware that there are some FLAASH processing steps that cannot
be interrupted, so the response to the Cancel button may not be immediate.

When FLAASH processing is complete, the output reflectance image appears in the Available Bands List. You
should also find the journal file and the template file in the FLAASH output directory.

4. Click Cancel in the FLAASH Atmospheric Correction Model Input Parameters dialog.

5. Examine and close the FLAASH Atmospheric Correction Results dialog.
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ENVI Tutorial: Using ASTER Data with the FLAASH Module