Chapter 2 - Ecosystems Ecology A. Learning Objectives
Chapter 2 - Ecosystems Ecology A. Learning Objectives
A. Learning Objectives
B. Content
1. Ecosystem Dynamics
The Ecosystem:
Ecosystem is defined as any unit that includes all of the organisms (i.e., the
“community”) in a given area interacting with the physical environment so that a flow
of energy leads to clearly defined trophic structure, biotic diversity, and material
cycles (i.e., exchange of materials between living and non-living parts within the
system).
Structure and function are two major concepts used to describe the roles individual
elements (plants, animals, water, and minerals) play in creating an ecosystem. Elements will
have both structural and functional components.
Structure refers to the spatial relations of an ecosystem's elements.
For example in a forest, trees and shrubs will form multi-layered tiers of
structure (dominant, co-dominant, intermediate, and suppressed), which
results from light diffusion through the canopy. This type of layering is
called light stratification. Wildlife will develop niches at different levels
within this forest structure forming a secondary degree of structure, which is
dependent on the first. Other organisms will develop niches based on the
existence of the particular wildlife forming a third layer of structure
dependent on the first two. Therefore, all layers (i.e. living organisms) are
dependent on one another in providing the structure of the niche they
inhabit.
Function refers to the processes that transform energy and cycle materials
(nutrients) through and among all elements (living and non-living) within the
structure of an ecosystem.
Compounds, such as water, carbon, nitrogen and phosphorus, are all cycled through
an ecosystem. Organisms, by the mere nature of their existence, will convert (cycle)
compounds into forms that are usable by other organisms. This small conversion of
energy is one link in the overall function of an ecosystem. From transforming
energy that is already within the system plus the daily addition of new energy from
the sun, an overall buildup of biomass begins to develop. Ecosystem function is
vital to the long-term growth and development of biomass.
As shown in the figure below, useful energy flows through ecosystems in a one-way
path, entering living things from the physical world, passing from one organism to
another and eventually escaping back to the physical environment in a less useful
form (due to entropy).
In most ecosystems, energy comes from sunlight, generated by nuclear chain
reactions in the sun.
In all ecosystems, energy eventually escapes from living organisms into the
surrounding physical world, usually as heat.
Heat energy passed into the environment is lost forever to the living world, since it is
such a diffuse form of energy that it cannot be used by living organisms.
Laws of Thermodynamics:
Before we go on to talk about the biological energy transfer system, we need to know
the basic knowledge of the physical chemical level of energy transfer -
thermodynamic (thermo = energy, dynamic = movement) - the study of energy
transfer.
Each ecosystem has a trophic structure that represents the different feeding
relationships that determine the route of energy flow and the pattern of chemical
cycling. Ecologists divide the species in a community or ecosystem into different
trophic levels based on their main source of nutrition.
o The term Trophic level is used to locate the position or level of an organism
during its energy-seeking activities.
B. Primary consumers. At the second trophic level are the herbivores, animals
that eat plants. Some examples are terrestrial insects, snails, grazing mammals,
seed-eating birds, aquatic zooplankton, and some fish.
C. Secondary consumers. At the third trophic level are the carnivores (meat
eaters) that eat herbivores. Just some of the many examples of this group include
terrestrial spiders, frogs, insects-eating birds, lions, many fish, and sea-stars.
They are the secondary consumers of ecosystems. Some animals like bears and
humans eat both plants and animals and are called omnivores.
D. Tertiary consumers. These are the carnivores that eat other carnivores.
E. Detritivores and decomposers. These are the consumers that derive energy
from detritus, organic wastes and dead organisms that are produced at all
trophic levels. Some examples of decomposers include the bacteria and fungi.
Also included are detritivores such as worms, arthropods and vultures. This
level often forms a major link between primary producers and higher-level
consumers, and is important components of the recycling process.
A food chain can be thought of as a transfer of food from trophic level to trophic
level. Food chains rarely are unbranched since several different primary consumers
may feed on the same plant species and a primary consumer may eat several species
of plants. The feeding relationships are usually woven into elaborate food webs
within an ecosystem.
Producers in forest ecosystems support two main food webs: 1) grazing food web
that stems directly from the living plants, and 2) detritus food web that begins with
dead plant parts and animal wastes.
The basic cycle begins when photosynthesizing plants use carbon dioxide
(CO2) found in the atmosphere or dissolved in water.
Some of this carbon is incorporated in plant tissue as carbohydrates, fats, and
protein; the rest is returned to the atmosphere or water primarily by aerobic
respiration.
Carbon is thus passed on to herbivores that eat the plants and thereby use,
rearrange, and degrade the carbon compounds.
Much of it is given off as CO2, primarily as a by-product of aerobic
respiration, but some is stored in animal tissue and is passed on to carnivores
feeding on the herbivores.
Ultimately, all the carbon compounds are broken down by decomposition, and
the carbon is released as CO2 to be used again by plants.
Some carbon is removed from circulation as deposits of coal, oil, natural gas,
and limestone. The burning of fossil fuels adds additional carbon dioxide to
the atmosphere.
In plants, much of the nitrogen is used in chlorophyll molecules which are essential
for photosynthesis and further growth. The different processes are as follows:
Nitrogen fixation/Conversion of N2. The conversion of nitrogen (N2) from the
atmosphere into a form readily available to plants and hence to animals and
humans is an important step in the nitrogen cycle, that determines the supply
of this essential nutrient. There are four ways to convert N2 (atmospheric
nitrogen gas) into more chemically reactive forms: 1) Biological fixation:
some symbiotic bacteria (most often associated with leguminous plants) and
some free-living bacteria are able to fix nitrogen and assimilate it as organic
nitrogen. An example of mutualistic nitrogen fixing bacteria are the Rhizobium
bacteria, which live in legume root nodules. These species are diazotrophs. An
example of the free-living bacteria is Azotobacter; 2) Industrial N-fixation : in
the Haber-Bosch process, N2 is converted together with hydrogen gas (H2) into
ammonia (NH3) fertilizer and explosives; 3) Combustion of fossil fuels :
automobile engines and thermal power plants, which release NOx; and 4)
Other processes : Additionally, the formation of NO from N2 and O2 due to
photons and especially lightning, are important for atmospheric chemistry, but
not for terrestrial or aquatic nitrogen turnover.
Assimilation. Plants can absorb nitrate or ammonium ions from the soil via
their root hairs. If nitrate is absorbed, it is first reduced to nitrite ions and then
ammonium ions for incorporation into amino acids, nucleic acids, and
chlorophyll. In plants which have a mutualistic relationship with rhizobia,
some nitrogen is assimilated in the form of ammonium ions directly from the
nodules. Animals, fungi, and other heterotrophic organisms absorb nitrogen as
amino acids, nucleotides and other small organic molecules.
Ammonification. When a plant or animal dies, or an animal excretes, the
initial form of nitrogen is organic. Bacteria, or in some cases, fungi, converts
the organic nitrogen within the remains back into ammonia, a process called
ammonification or mineralization.
Nitrification. The conversion of ammonia to nitrates is performed primarily
by soil-living bacteria and other nitrifying bacteria. The primary stage of
nitrification, the oxidation of ammonia (NH3) is performed by bacteria such as
the Nitrosomonas species, which converts ammonia to nitrites (NO2-). Other
bacterial species, such as the Nitrobacter, are responsible for the oxidation of
the nitrites into nitrates (NO3-).
The biosphere consists of the relatively thin layer of soil, water, and atmosphere where
life is found on the earth. It is composed of biotic factors (living organisms, including
individual plants and animals, and abiotic factors (materials and forces), such as
temperature, humidity, elevation, precipitation, wind, light, shading, soil chemistry, and
atmospheric pressure. The biosphere extends from Pacific Ocean Mariana Trench depths of
about 10,000 meters (≈32,800 feet) to Himalayan Mountain elevations of almost the same
extent. Compared to the size of the earth itself, the biosphere is analogous to the skin of an
apple-a very limited life-support system encircling the planet.
For purpose of discussion, the biosphere can be divided into aquatic ecosystems and
terrestrial ecosystems.
Aquatic Ecosystems:
More than 70% of the earth is covered by water, and close to 97% of that water is
saltwater in the planet’s oceans, seas, and estuaries. The remaining 3% is freshwater, most of
which is frozen in ice caps and glaciers (76%) or stored underground (23%). There are two
types of aquatic ecosystems: Freshwater ecosystems and Saltwater ecosystems:
Freshwater ecosystems are the inland aquatic ecosystems that usually has a salinity
less than (< 500 mg/L), cover less than 1% of the earth’s surface and the most familiar
freshwaters are streams, creeks, rivers, and lakes. Not only are they most visible, but they
play a vital role in supporting fish and wildlife as well as supplying drinking water for
humans and livestock. Also, the continuous movement of water provides fresh nutrients
into the ecosystems.
Freshwater ecosystem can be divided into Lentic Habitat and Lotic Habitat.
Lentic Habitat - Calm freshwater habitat or standing water; refers to standing or relatively
still water; Latin lentus – sluggish
Ponds – a body of standing water, either natural or man-made, smaller than a lake
Lakes – a body of relatively still freshwater of considerable size, localized in a basin,
that is surrounded by land
Swamps – a freshwater wetland that is forested
Marsh – contains non-woody plants
Bog – a wetland that accumulates peat, a deposit of dead plant material – often
mosses and in a majority of cases, Sphagnum moss
The fact that ocean ecosystems dominate our planet is most clearly evident in
spacecraft digital imagery showing the earth as a blue, mostly water-covered planet
suspended in space. Because of their immense mass and heat capacity, oceans and seas
serve to buffer the temperature extremes that would occur without them. As a result,
average temperatures on earth are continuously favorable to life at almost all latitudes, the
only exceptions being the North and South Poles where only a few species thrive. The
stored heat in marine water prevents them from freezing except in shallow coastal
embayment. Saltwater habitats are therefore beneficial year-round to marine plant and
animal life. Even in relatively cold Antarctic Ocean waters, prolific populations of very
small aquatic plants and animals play an important role in supporting fishes, squids, seals,
and whales.
Earth’s oceans also act as a sink for carbon dioxide, slowly dissolving quantities of
the gas added to the planet’s atmosphere by both natural processes and industrial
developments. Although the earth’s level of atmospheric carbon dioxide are rising, due
mainly to the combustion of fossil fuels, they would be rising even faster if the oceans
and seas were not performing this function.
Coastal Ecosystems:
Are regions of remarkable biological productivity and high accessibility
provide a wide array of goods and services: they host the world’s primary ports of
commerce;
primary producers of fish, shellfish, and seaweed for both human and animal
consumption;
a considerable source of fertilizer, pharmaceuticals, cosmetics, household
products, and construction materials
store and cycle nutrients, filter pollutants from inland freshwater systems, and
help to protect shorelines from erosion and storms.
Seagrasses Beds
o Composed of Angiosperms (flowering plants) that live life entirely underwater
o Primary productivity is among the highest measured (500 - 4000 g C/m2/year)
o Important feeding and refuge habitat for fishery species (shrimp, scallops,
fish)
o Seagrasses act as sediment stabilizers help to filter water
Salt Marsh
o Salt marshes are intertidal flats covered by grassy vegetation.
o Most commonly found in protected areas with a moderate tidal range, such as
the landward side of barrier islands.
o Flood daily at high tide and then drain through a series of channels.
Sandy/Beach Shore
o Sandy or beach shores are inhabited by millions of very small and important
critters or invertebrates called macrofauna and meiofauna.
o These beach invertebrates are also considered indicators of environmental
change because they spend so much time in close contact with the sand grains
and potential pollutants.
Tidal Flats
o found on coastlines and on the shores of lagoons and estuaries in intertidal
areas (flooded at high tide and always exposed to air at low tides)
o sandwiched between marine, freshwater and land environments and are found
in areas where there are low slopes and regular flooding occurs
o these are areas where sediments from river runoff, or inflow from tides,
deposit mud or sand
Mangrove
o an assemblage of tropical trees and shrubs that inhabit the coastal intertidal
zone
o mangrove community is composed of plant species whose special adaptations
allow them to survive the variable flooding and salinity stress conditions
imposed by the coastal environment
Estuary
o a semi-enclosed (partially enclosed) coastal body of water (with one or more
rivers or streams flowing into it) which has a free connection to the open sea
o coastal wetlands where sea water and fresh water mix, found mostly in the
mouths of rivers
o strongly affected by tidal action and within it sea water is mixed or diluted
with freshwater from land drainage
o high nutrient levels in estuarine waters provide a rich "soup" that nourish
plants and animals making estuaries one of the most productive ecosystems on
earth.
Marine Ecosystem
Ocean
o The largest of all the
ecosystems, oceans are very
large bodies of water that
dominate the Earth's
surface.
o Ocean regions are separated
into separate zones:
intertidal, pelagic, abyssal,
and benthic: all four zones have a great diversity of species (the ocean
contains the richest diversity of species even though it contains fewer
species than there are on land)
Coral Reefs
o widely distributed in warm shallow waters and can be found as barriers
along continents (e.g., the Great Barrier Reef, Australia), fringing islands, and atolls.
o the dominant organisms in coral reefs are corals: corals are interesting
since they consist of both algae (zooanthellae) and tissues of animal
polyp.
o Reef waters tend to be nutritionally poor, corals obtain nutrients through
the algae via photosynthesis and also by extending tentacles to obtain
plankton from the water .
Terrestrial Ecosystems:
Urban ecology is the study of ecosystems that include human living in cities and
urbanizing landscape. It is an interdisciplinary field that aims to understand how human and
ecological process can coexist in human-dominated systems and help societies with their
efforts to become more sustainable with the application of the normative theories of
sustainable urban planning and development.
IV..References
BOTKIN, D.B. & E.A. KELLER. 1998. Environmental Science: Earth as a Living Planet (2nd ed.).
John Wiley & Sons, Inc., New York.
DEPARTMENT OF ENVIRONMENT AND NATURAL RESOURCES (DENR) & UNITED
NATIONS ENVIRONMENT PROGRAMME (UNEP). 1997. Philippine Biodiversity: An
Assessment and Action Plan. Bookmark, Inc., Makati City, Philippines.
ENGER, E. & B. SMITH. 1999. Environmental Science: A study of Interrelationships. McGraw-Hill
Book Co., Singapore.
HALLARE, A. 2001. General Ecology: Concepts and Selected Laboratory Exercises. Busybook
Distributors, Sampaloc, Manila.
JOHNSON, G. 2003. The Living World (3rd ed.). McGraw-Hill Companies, New York.
MEDINA, C., M. ZAFARALLA, Z. SIERRA, V. CUEVAS, D. MACANDOG & C. CERVANCIA.
n.d. ENS 201: Ecosystem Structure and Dynamics. University of the Philippines Open
University.
MILLER, G. TYLLER, JR. 2005. Living in the Environment: Principles, Connections, and Solutions
(14th ed.). Brooks/Cole Publishing Co., Singapore.
ODUM, E. 1971. Fundamentals of Ecology (3rd ed.). W. B. Saunders Co., Philadelphia.
SMITH, R.L. & T. SMITH. 1998. Elements of Ecology (4th ed.). The Benjamin/Cummings
Publishing Company, Inc., California.
YADAV, M. 2003. Ecology. Discovery Publishing House, New Delhi.
You have reached the last part of this unit. I hope you have learned a lot and understood all
the basics in ecosystems and reviewed on the cycling of materials and nutrients through an ecosystem
before we proceed to another chapter. Thank you for your efforts and consideration in this mode of
learning.
Keep it up! Stay hydrated and sanitize always. Thank you and God Bless!
“Educating the mind without educating the heart is no education at all.” -Aristotle