ATOMIC STRUCTURE by Buet
ATOMIC STRUCTURE by Buet
Is matter continuous or discontinuous? Can you break a matter as long as you want?
Democritus concept of atom: in fifth century
Would you reach some ultimate particle beyond which further division is impossible?
Dalton’s Atomic Theory: in 1808 by English scientist J. Dalton
Discovery of electron: in 1897 by British physicist J. J. Thomson To answer these questions, atomic theory developed. The concept of an atom is
Determination of electron charge and mass: in 1909 by R. Millikan originated from Greek philosopher Democritus.
All atoms of a given element are identical, having the same size, mass, and chemical
properties. The atoms of one element are different from the atoms of all other elements
Compounds are formed by the joining of atoms of two or more (a) According to Dalton’s atomic theory, atoms of the same element are identical, but
elements. In any compound, atoms combined only in small whole-number ratios, such as
1:1, 1:2, 2:1, 2:3, to form compounds. H2O, CO2, CH4 etc……. atoms of one element are different from atoms of other elements. (b) Compound formed
from atoms of elements X and Y. In this case, the ratio of the atoms of element X to the
Chemical reaction involves only the separation, combination, or rearrangement of atoms; atoms of element Y is 2:1. Note that a chemical reaction results only in the
it does not result in their creation or destruction
rearrangement of atoms, not in their destruction or creation.
Discovery of Electron Discovery of Electron
J. J. Thomson used a cathode ray tube and his
knowledge of electromagnetic theory to In some experiments, two electrically
determine the ratio of electric charge to the charged plates and a magnet were added to
mass of an individual electron. Cathode ray the outside of the cathode ray tube. The
tube is a glass tube from which most of the symbols N and S denote the north and south
air has been evacuated. When the two metal poles of the magnet. The cathode rays will
plates are connected to a high-voltage source, strike the end of the tube at A in the presence
the negatively charged plate, called the of a magnetic field, at C in the presence of an
cathode, emits an invisible ray. The cathode electric field, and at B when there are no
ray is drawn to the positively charged plate, external fields present or when the effects of
called the anode, where it passes through a the electric field and magnetic field cancel
hole and continues traveling to the other end each other.
of the tube. When the ray strikes the specially
coated surface, it produces a strong Because the cathode ray is attracted by the plate bearing positive charges and repelled
fluorescence, or bright light. by the plate bearing negative charges, it must consist of negatively charged particles.
He calculated the ratio of the electric charge (e) to its electron’s mass (me), which Using this charge value in charge to mass ratio formula, he calculated mass of
is -1.76 X 108 C/g. He could not obtain either charge or the mass
electron, which is 9.109 X 10-28 g
Second, a few of the alpha particles (about 1 in 8000) were deflected at very sharp angles. In Although the protons are confined to the nucleus of the atom,
fact, some reflected completely backwards and were detected next to the gun from which they the electrons are conceived of as being spread out about the
were first produced. This reveals that the positive charge in an atom must all be packed nucleus at some distance from it.
together in one small region of the atom. He called that region the nucleus of the atom. The
positively charged particles in the nucleus are called protons.
energy only in discrete quantities, like small packages or bundles. Planck gave the name example, hn , 2 hn , 3 hn and so forth, but never, for example, 1.67 hn or 4.98 hn. Therefore,
quantum to the smallest quantity of energy that can be emitted (or absorbed) in the this equation can be again written as E= nhn, n is called quantum number.
form of electromagnetic radiation. Quantum effect depends on the mass of the object. The smaller the mass, the more likely
you will see quantum effects. Atoms, particularly electrons have small enough masses to
exhibit quantization of energy.
Photoelectric Effect Photoelectric Effect
In 1905, Albert Einstein used the quantum theory to solve another mystery in physics,
the photoelectric effect, a phenomenon in which electrons are ejected from the surface
of certain metals exposed to light of at least a certain minimum frequency, called the
threshold frequency (characteristics of the particular metal). An apparatus for studying the photoelectric effect. Light
The photoelectric effect could not be explained by the wave theory of light. Einstein of a certain frequency falls on a clean metal surface.
suggested that a beam of light is really a stream of particles. These particles of light are Ejected electrons are attracted toward the positive
now called photons. Using Planck’s quantum theory of radiation as a starting point, electrode. The flow of electrons is registered by a
Einstein deduced that each photon must possess energy E , given by the equation detecting meter. Light meters used in cameras are based
on photoelectric effect.
Calculate the energy (in joules) of (a) a photon with a wavelength of 5.00 X 104 nm
(infrared region) and (b) a photon with a wavelength of 5.00 X 10-2 nm (X ray region).
Dx and Dp are the uncertainties in measuring the position and momentum of the particle,
respectively.
Bohr’s suggestion that the energy of an electron in an atom is quantized remains unchallenged.
m = mass of the electron
But his theory did not provide a complete description of electronic behavior in atoms. E = Total energy of the electron
In 1926 the Austrian physicist Erwin Schrödinger, using a complicated mathematical technique, V = Potential energy of the electron
formulated an equation that describes the behavior and energies of submicroscopic particles in
ψ = Wave function
general.
Schrödinger Equation (1926) Schrödinger Equation (1926)
Acceptable solutions to the wave equation, that is solutions which are
physically possible, must have certain properties: Several wave functions called ψ1, ψ2, ψ3…. will satisfy these conditions to the
wave equation, and each of these has a corresponding energy E 1, E2 , E3 . ….
1. ψ must be continuous.
2. ψ must be finite. Each of these wave functions ψ1, ψ2 , etc. is called an orbital, by analogy with
3. ψ must be single valued. the orbits in the Bohr theory.
4. The probability of finding the electron over all the space from plus infinity
to minus infinity must be equal to one. In a hydrogen atom, the single electron normally occupies the lowest of the
The probability of finding an electron at a point x, y, z is ψ2, so energy levels E 1. This is called the ground state. The corresponding wave
function ψ1 describes the orbital, that is the volume in space where there is a
high probability of finding the electron.
A collection of orbitals with the same value of n is frequently called a shell. One or more
orbitals with the same n and different l values are referred to as subshells of a given shell.
n=2 n=3
n=1 For example, the shell with n= 2 is composed of two subshells, l= 0 and 1. These subshells
are called the 2s and 2p subshells where 2 denotes the value of n , and s and p denote
the values of l.
orbitals fall into groups. from the nucleus, and on the direction in space (x, y or z). Orbitals of this kind occurs
In the first group of solutions the value of the wave function ψ, and hence the probability when l=1. These are called p orbitals and there are three possible values of the magnetic
of finding the electron ψ2, depends only on the distance r from the nucleus, and is the quantum number (m = -1, 0, +1). Therefore, there are three orbitals which are identical in
same in all directions. energy, shape and size, which differ only in their direction in space. These three solutions
This leads to a spherical orbital and occurs when l=0. These are called s orbital. When l=0, Ψx = f(r) . f(x)
m is also 0. So there is only one such orbital for each value of n. Ψy = f(r) . f(y)
Ψz = f(r) . f(z)
As these are identical in energy, three degenerate p orbitals occur for each of the values
of n = 2, 3, 4……
Orbital Groups Spin Quantum Number (ms)
In the third group of solutions to the wave equation depends on the distance r from the It refers to the two possible orientation of the spin axis of an electron. The values are
nucleus, and also on two directions in space, for example, +1/2 and -1/2.
Ψ = f(r) . f(x) . f(y) An electron acts as though it were spinning on its axis like the earth. Such an electron
These group of orbitals has l=2. These are called d orbitals. There are five solutions spin would give rise to a circulating electric charge that would generate a magnetic field.
corresponding to m= -2, -1, 0, +1 and +2. These are all equal in energy. Therefore, five In this way, an electron behaves like a small bar magnet, with a north and south pole.
degenerate d orbitals occur for each of the values of n = 3, 4, 5……
A further set of solution s occurs when l=3, and these are called f orbitals. There are
seven values of m= -3, -2, -1, 0, +1. +2 and +3. Seven degenerate d orbitals are formed
when of n = 4, 5, 6……
Spin Quantum Number (ms) Applying the rules for quantum number
The Spin Quantum Number begins with an experiment by Otto Stern and Walther State whether each of the following sets of quantum numbers is permissible for an
Gerlach, which demonstrated that a beam of atoms split evenly into two. This is electron in an atom.
due to a property of the electrons that causes them to generate their own a. n = 1, l = 1, ml = 0, ms = +1/2
b. n = 3, l = 1, ml = -2, ms = -1/2
magnetic field and, consequently, their own internal momentum.
c. n = 2, l = 1, ml = 0, ms = +1/2
d. n = 2, l = 0, ml = 0, ms = 1
Quantum Mechanical Description of H Atom Quantum Mechanical Description of H Atom
The Schrödinger equation specifies the possible energy states the electron can occupy in a To distinguish the quantum mechanical description of an atom from Bohr’s model, we speak
hydrogen atom and identifies the corresponding wave functions () . These energy states and of an atomic orbital, rather than an orbit.
wave functions are characterized by a set of quantum numbers, with which we can construct a
comprehensive model of the hydrogen atom. An atomic orbital can be thought of as the wave function of an electron in an atom. An
atomic orbital is pictured quantitatively by describing the region of space where there is high
The square of the wave function, 2 , defines the distribution of
probability of finding the electrons. Atomic orbital has a definite shape.
electron density in three-dimensional space around the nucleus.
Regions of high electron density represent a high probability of
An atomic orbital, therefore, has a characteristic energy, as well as a characteristic
locating the electron, whereas the opposite holds for regions of
distribution of electron density.
low electron density.
R(r) is a function that depends on the distance from the nucleus, which in turn depends on
where, the quantum numbers n and l.
Θ(θ) is an function of θ, which depends on the quantum numbers l and m
Changing to polar coordinates, becomes
Ф(φ) is a function of φ, which depends only on the quantum number m
Radial and Angular Function Electron Probability Density vs. Radial Probability
Probability Density
ψ = R(r)nl. Aml
This splits the wave function into two parts which can be solved separately:
1. R(r) the radial function, which depends on the quantum numbers n and l.
Figure: Probability of finding the electron
2. Aml, the total angular wave function, which depends on the quantum numbers l and m in the ground state of the hydrogen atom
at different points in space
The radial function has no physical meaning, but R2 gives the probability of finding the
electron in a small volume near the point at which R is measured.
(a) Density dot shows electron probability. (b) [Probability density plot] The electron probability
density is greatest at r=0, i.e. at the nucleus and falls off with increasing r. The line never actually
reaches the horizontal axis, therefore, the probability of finding the electron at very large values of r
is very small but not zero
Electron Probability Density vs. Radial Probability Electron Probability Density vs. Radial Probability
Radial Probability (b) A plot of Ψ2 versus r shows that the electron probability density is
greatest at r = 0 and falls off smoothly with increasing r. The density of
Radial Probability is the probability of finding an electron at a distance r from the nucleus. It can be the dots is therefore greatest in the innermost shells (c) The surface
calculated by adding together the probabilities of an electron being at all points on a series of x area of each shell, given by 4πr2, increases rapidly with increasing r. (d)
spherical shells of radius r1, r2, r3,……, rx-1, rx. If we count the number of dots in each spherical shell, we obtain the
total probability of finding the electron at a given value of r. Because the
we are dividing the atom into very thin concentric surface area of each shell increases more rapidly with increasing r than
shells, much like the layers of an onion, and the electron probability density decreases, a plot of electron probability
versus r (the radial probability) shows a peak at a particular distance.
calculating the probability of finding an electron on
When r is very small, the surface area of a spherical shell is so small that
each spherical shell. Recall that the electron
the total probability of finding an electron close to the nucleus is very
probability density is greatest at r = 0, so the density
low; at the nucleus, the electron probability vanishes because the
of dots is greatest for the smallest spherical shells.
surface area of the shell is zero.
Electron Probability Density vs. Radial Probability Electron Probability Density vs. Radial Probability
For the hydrogen atom, the peak in the radial probability plot occurs at r = 0.529 Å
(52.9 pm), which is exactly the radius calculated by Bohr for the n = 1 orbit. Thus
the most probable radius obtained from quantum mechanics is identical to the
radius calculated by classical mechanics. In Bohr’s model, however, the electron
was assumed to be at this distance 100% of the time, whereas in the Schrödinger
model, it is at this distance only some of the time. The difference between the two
Probability Densities for the 1s, 2s, and 3s Orbitals of the Hydrogen Atom (a) The electron probability density in
models is attributable to the wavelike behavior of the electron and the Heisenberg any plane that contains the nucleus is shown. Note the presence of circular regions, or nodes, where the probability
Uncertainty Principle. density is zero. (c) In these plots of electron probability as a function of distance from the nucleus (r) in all
directions (radial probability), the most probable radius increases as n increases, but the 2s and 3s orbitals have
regions of significant electron probability at small values of r.
Electron Probability Density vs. Radial Probability Radial Distribution Functions
Note that all three orbitals are spherically symmetrical. For the 2s and 3s orbitals, For a given value of r the number of
however (and for all other s orbitals as well), the electron probability density does not small volume is 4πr2, so the
probability of the electron being at
fall off smoothly with increasing r. Instead, a series of minima and maxima are
a distance r from the nucleus is 4πr2
observed in the radial probability plots (part (c) in the figure). The minima correspond
R2. This is called the radial
to spherical nodes (regions of zero electron probability), which alternate with
distribution function.
spherical regions of nonzero electron probability.
• For a fixed n value, the most probable radius decreases slightly as the subsidiary
Orbitals are generally drawn as three-dimensional surfaces that enclose 90% of the electron density, as was
quantum number increases
shown for the hydrogen 1s, 2s, and 3s orbitals. Although such drawings show the relative sizes of the
• No. of radial nodes = n-l-1
orbitals, they do not normally show the spherical nodes in the 2s and 3s orbitals because the spherical nodes
lie inside the 90% surface. Fortunately, the positions of the spherical nodes are not important for chemical
bonding. This makes sense because bonding is an interaction of electrons from two atoms which will be most
sensitive to forces at the edges of the orbitals.
p Orbitals p Orbitals
Just as with the s orbitals, the size and complexity of the p orbitals for any atom
increase as the principal quantum number n increases. The shapes of the 90%
probability surfaces of the 3p, 4p, and higher-energy p orbitals are, however,
essentially the same.
a b
Figure: Electron Probability Distribution for a Hydrogen 2p Orbital The nodal plane of zero electron density
separates the two lobes of the 2p orbital. (a) Because this orbital has two lobes of electron density arranged along
the z axis, with an electron density of zero in the xy plane (i.e., the xy plane is a nodal plane), it is a 2pz orbital. (b) In
each case, the phase of the wave function for each of the 2p orbitals is positive for the lobe that points along the
positive axis and negative for the lobe that points along the negative axis. It is important to emphasize that these
signs correspond to the phase of the wave that describes the electron motion, not to positive or negative charges.
d Orbitals d Orbitals
The hydrogen 3d orbitals have more complex shapes than the 2p orbitals. All five 3d orbitals contain two
nodal surfaces, as compared to one for each p orbital and zero for each s orbital. In three of
the d orbitals, the lobes of electron density are oriented between the x and y, x and z,
and y and z planes; these orbitals are referred to as the 3dxy, 3dxz, and 3dyz orbitals, respectively. A
fourth d orbitals has lobes lying along the x and y axes; this is the 3dx2-y2 orbital. The fifth 3d orbital,
called 3dz2 orbital, has a unique shape. It looks like a 2p orbital combined with an additional doughnut
of electron probability lying in the xy plane. Despite its peculiar shape, it is mathematically equivalent to
the other four and has the same energy.
Like the s and p orbitals, as n increases, the size of the d orbitals increases, but the overall shapes
remain similar
The surfaces shown enclose 90% of the total electron probability for the five hydrogen 3d orbitals
Atomic Orbitals Orbital Energies
Figure: Orbital Energy Level Diagram for the Hydrogen
Atom (considering atoms or ions with only a single
electron). Each box corresponds to one orbital. Note
that the difference in energy between orbitals
decreases rapidly with increasing values of n. The
orbital energies depend on only the principal
quantum number n. Consequently, the energies of the
2s and 2p orbitals of hydrogen are the same; the
energies of the 3s, 3p, and 3d orbitals are the same;
and so forth.
corresponds to one orbital. Note that the difference in energy between orbitals decreases rapidly with dependence of energy in energy Equation, electrons in the 1s orbital of carbon, which has a nuclear
increasing values of n. The orbital energies depend on only the principal quantum number n. charge of +6, lie roughly 36 times lower in energy than those in the hydrogen 1s orbital, and the 1s
Consequently, the energies of the 2s and 2p orbitals of hydrogen are the same; the energies of the 3s, orbital of tin, with an atomic number of 50 is roughly 2500 times lower still. The most stable and tightly
3p, and 3d orbitals are the same; and so forth. bound electrons are in orbitals (those with the lowest energy) closest to the nucleus.
The energies of the orbitals in any species with only one electron can be calculated by a minor variation
of Bohr’s equation, which can be extended to other single-electron species by incorporating the nuclear For example, in the ground state of the hydrogen atom, the single electron is in the 1s orbital, whereas
charge Z (the number of protons in the nucleus): in the first excited state, the atom has absorbed energy and the electron has been promoted to one of
the n = 2 orbitals. In ions with only a single electron, the energy of a given orbital depends on only n,
E = -RH(z2/n2) and all subshells within a principal shell, such as the s, px, py, and pz orbitals, are degenerate.
Effective Nuclear Charge Effective Nuclear Charge
If an electron is far from the nucleus, then at any given moment, most of the other electrons will
For an atom or an ion with only a single electron, we can calculate the potential energy by
be between that electron and the nucleus. Hence the electrons will cancel a portion of the positive
considering only the electrostatic attraction between the positively charged nucleus and the
charge of the nucleus and thereby decrease the attractive interaction between it and the electron
negatively charged electron. When more than one electron is present, however, the total
farther away. As a result, the electron farther away experiences an effective nuclear charge (Zeff) that
energy of the atom or the ion depends not only on attractive electron-nucleus interactions but
is less than the actual nuclear charge Z. This effect is called electron shielding. If an electron is very
also on repulsive electron-electron interactions. When there are two electrons, the repulsive close to the nucleus, then at any given moment most of the other electrons are farther from the
interactions depend on the positions of both electrons at a given instant, but because we nucleus and do not shield the nuclear charge. At r ≈ 0, the positive charge experienced by an electron is
cannot specify the exact positions of the electrons, it is impossible to exactly calculate the approximately the full nuclear charge, or Zeff ≈ Z. At intermediate values of r, the effective nuclear
repulsive interactions. Consequently, we must use approximate methods to deal with the charge is somewhere between 1 and Z: 1 ≤ Zeff ≤ Z. Thus the actual Zeff experienced by an electron in a
effect of electron-electron repulsions on orbital energies. given orbital depends not only on the spatial distribution of the electron in that orbital but also on the
distribution of all the other electrons present.
Effective Nuclear Charge and Orbital E Effective Nuclear Charge and Orbital E
Although a 2s electron spends most of its time (on average) slightly farther from the nucleus than a
Within a given principal shell of a multielectron atom, the
2p electron, the electron density near the nucleus is actually greater for the 2s electron (see the
orbital energies increase with increasing l. An ns orbital
small maximum for the 2s orbital in Figure). For this reason, the 2s orbital is said to be more
always lies below the corresponding np orbital, which in
“penetrating” than the 2p orbital. Therefore, a 2s electron is less shielded by the 1s electrons and is
turn lies below the nd orbital. These energy differences are
more strongly held by the nucleus. In fact, for the same principal quantum number n , the
caused by the effects of shielding and penetration, the
penetrating power decreases as the angular momentum quantum number / increases, or
extent to which a given orbital lies inside other filled
s>p>d>f>…
orbitals.
Because the stability of an electron is determined by the strength of its attraction to the nucleus, it
For example, an electron in the 2s orbital penetrates inside a filled 1s orbital more than an electron in a 2p orbital does. follows that a 2s electron will be lower in energy than a 2p electron.
Hence in an atom with a filled 1s orbital, the Zeff experienced by a 2s electron is greater than the Zeff experienced by a To put it another way, less energy is required to remove a 2 p electron than a 2 s electron because a
2p electron. Consequently, the 2s electron is more tightly bound to the nucleus and has a lower energy, consistent with 2 p electron is not held quite as strongly by the nucleus. The hydrogen atom has only one electron
the order of energies. and, therefore, is without such a shielding effect.
Energy of the Orbitals Filling of the Orbitals
Figure: Orbital Energy Level Diagram for a Typical Multielectron Atom
Figure: The order in which atomic subshells are
filled in a many-electron atom. Start with the 1s
Because of the effects of shielding and the different radial distributions of
orbital and move downward, following the
orbitals with the same value of n but different values of l, the different
direction of the arrows. Thus, the order goes as
subshells are not degenerate in a multielectron atom. For a given value of follows: 1s , 2s , 2p , 3s , 3p , 4s , 3d , . . . .
n, the ns orbital is always lower in energy than the np orbitals, which are
lower in energy than the nd orbitals, and so forth. As a result, some
subshells with higher principal quantum numbers are actually lower in
energy than subshells with a lower value of n; for example, the 4s orbital
Because of
is lower in energy than the 3d orbitals for most atoms.