Cell Based Assay
Cell Based Assay
Comet assay
• Comet assay under alkaline condition was employed to evaluate single and
double strand breaks at single cell level.
• In brief, 3.5 × 105 PBMC cells/well was treated with 2x IC50
concentrations of drug for 2 h.
• After collection and counting the cells, about 104 cells in a volume of
100 µl were gently pipetted in a 37 °C PBS solution containing 1% LMPA
(low melting point agarose), and were spread over a microscope slides
precoated with 1% conventional agarose under a coverslip, and chilled in
4 °C for 15 min to solidify.
• After removal of the coverslip, the slides were submerged for 1 h in cold
lysis buffer (10 mM Tris, 2.5 M NaCl, 100 mM EDTA and 1% freshly
added Triton X100, pH 10), and then immersed in denaturing buffer (1 mM
EDTA and 300 mM NaOH, pH 13) at 4 °C for 30 min to unwind the DNA
in the lysed cells.
• Subsequently, slides were electrophoresed under the same denaturing
condition for 30 min at 0.6 V/cm. after electrophoresis, slides were dipped
in neutralization solution (0.4 M Tris, pH 7.5) for 5 min, stained with
Ethidium Bromide(2 µg/ml) , and imaged by a fluorescent microscope
(Axioscope 2 plus, Zeiss, Germany).
• Open Comet software was used to analyze the Comet images, and the
presented data are the results of analysis of at least 100 comets in each
sample.
• Ten microliters (10 μl) of 0.4% Trypan Blue (w/v) and 10 μl of the
PBMCs suspension were transferred into a cryovials tube (dilution factor
= 2) and mixed,
• It was then allowed to stand for maximum of 5 min. While the cover-slip
was in place, the pipette was used to transfer 10 μl of Trypan blue-PBMCs
suspension mixture to both chambers of the haemocytometer.
• Both the viable and non-viable cells were counted using a light
microscope. Non-viable cells were stained blue, whereas viable ones
remain colourless. The percentage of viable cells was calculated.
MTT Assay
Haemolytic activity