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Cell Based Assay

Cellular assays, or cell-based assays, can be used in both biomedical research and drug-discovery screening applications to efficiently quantify cytotoxicity, biological activity, biochemical mechanisms and off-target interactions.

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0% found this document useful (0 votes)
48 views4 pages

Cell Based Assay

Cellular assays, or cell-based assays, can be used in both biomedical research and drug-discovery screening applications to efficiently quantify cytotoxicity, biological activity, biochemical mechanisms and off-target interactions.

Uploaded by

rajapakshac252
Copyright
© © All Rights Reserved
We take content rights seriously. If you suspect this is your content, claim it here.
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Download as PDF, TXT or read online on Scribd
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PBMC isolation

• PBMCs were separated by centrifugation of blood diluted with RPMI-1640


medium over Histopaque (Ficol) 1077 (Sigma-Aldrich, St. Louis, MO) at
200g for 15 min.
• The interphase layer was collected by pipette and was washed in RPMI-
1640 medium.
• The pellet was resuspended to a final volume of 0.68 ml with RPMI-1640
medium.
• The cells were cultured within T25 culture flask for overnight in the
supplemented RPMI-1640 with fetal bovine serum (FBS), 100 U/mL
penicillin, 100 µg/mL streptomycin and 2 mM L-glutamine at 37°C for
24 hours before any treatments.
• Before performing the experiment, the medium was discarded; the
separated cells were washed and counted. The cell viability was measured
by trypan blue staining to greater than 95% viability.

Comet assay

• Comet assay under alkaline condition was employed to evaluate single and
double strand breaks at single cell level.
• In brief, 3.5 × 105 PBMC cells/well was treated with 2x IC50
concentrations of drug for 2 h.
• After collection and counting the cells, about 104 cells in a volume of
100 µl were gently pipetted in a 37 °C PBS solution containing 1% LMPA
(low melting point agarose), and were spread over a microscope slides
precoated with 1% conventional agarose under a coverslip, and chilled in
4 °C for 15 min to solidify.
• After removal of the coverslip, the slides were submerged for 1 h in cold
lysis buffer (10 mM Tris, 2.5 M NaCl, 100 mM EDTA and 1% freshly
added Triton X100, pH 10), and then immersed in denaturing buffer (1 mM
EDTA and 300 mM NaOH, pH 13) at 4 °C for 30 min to unwind the DNA
in the lysed cells.
• Subsequently, slides were electrophoresed under the same denaturing
condition for 30 min at 0.6 V/cm. after electrophoresis, slides were dipped
in neutralization solution (0.4 M Tris, pH 7.5) for 5 min, stained with
Ethidium Bromide(2 µg/ml) , and imaged by a fluorescent microscope
(Axioscope 2 plus, Zeiss, Germany).
• Open Comet software was used to analyze the Comet images, and the
presented data are the results of analysis of at least 100 comets in each
sample.

Trypan Blue assay

• Ten microliters (10 μl) of 0.4% Trypan Blue (w/v) and 10 μl of the
PBMCs suspension were transferred into a cryovials tube (dilution factor
= 2) and mixed,
• It was then allowed to stand for maximum of 5 min. While the cover-slip
was in place, the pipette was used to transfer 10 μl of Trypan blue-PBMCs
suspension mixture to both chambers of the haemocytometer.
• Both the viable and non-viable cells were counted using a light
microscope. Non-viable cells were stained blue, whereas viable ones
remain colourless. The percentage of viable cells was calculated.

MTT Assay

• The cytotoxic activity of compounds can be evaluated using the MTT


method described by Mosmann [18].
• PBMC (5 × 10 5cells/well) are cultured in 96-well plates in RPMI 1640
complete culture medium containing 10 % fetal calf serum (FCS) in the
presence of compound at different concentrations previously diluted in
culture medium, for 24 h at 37 °C, and under 5 % CO2.
• Next, 20 μL of MTT solution at 5 mg/mL isadded to each well, and the
plates are incubated for 4 h, at 37 °C, and under 5 % CO2.
• After incubation, the precipitated formazan crystals are dissolved with 200
μL of 20 % SDS (sodium dodecyl sulfate), and absorbance is recorded at
570 nm.

Haemolytic activity

• Collect blood in heparin or sodium citrate tubes [Sodium Citrate 3.2%]


tubes and immediately centrifuge at 1700× g for 5 min. Avoid using needles
above 23 G in order to minimize pre-analyte hemolysis.
• Remove the supernatant by aspiration and wash the erythrocytes by adding
2 mL of PBS pH~7. Centrifuge at 1700× g for 5 min. Repeat the washing
step three times or until supernatant is clear.
• Remove supernatant and dilute the erythrocyte pellet 1:100 in PBS pH~7
to obtain a 1% erythrocyte suspension.
• 250 μL of test compound, water, or detergent were mixed with 250 μL 1%
erythrocyte suspension in an Eppendorf tube.
• Samples were subsequently incubated at 37 °C for 60 min.
• After incubation, the tubes were centrifuged at 1700× g for 5 min, and then
50 μL of the supernatants were transferred to transparent, flat-bottom 96-
well plates
• absorption was measured at 405, 530, and 570 nm in a microplate reader.
• Triton X 100 10 % v/v van be used as the positive control
Anti-haemolysing effect (of antioxidants)

Peroxyl radical-induced haemolysis of erythrocytes

• AAPH–PBS solution (30 mM as the final concentration) was added to a


suspension of erythrocytes in PBS (3.0%, v/v) in which the DMSO solution
of antioxidant was added in advance to a certain concentration
• The suspension was incubated at 37oC. Samples were taken from the above
incubation mixture and centrifuged at 1700 g for 5 min to remove the
erythrocytes and obtain the supernatant.
• The percentage of haemolysis was determined by measuring the
absorbance of
• the supernatant at 540 nm (A540) and compared with that of complete
haemolysis in the absence of antioxidant
• To avoid the influence of DMSO on the haemolysis, it is worth noting that
the final volume of DMSO in all the experiments was 1.0% (v/v), and the
same amount of DMSO was added to the control experiment as well.

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