Biochrom Ultrospec 1100 Pro Spectrophotometer - User Manual
Biochrom Ultrospec 1100 Pro Spectrophotometer - User Manual
Declaration of Conformity
This is to certify that the Ultrospec 1100 pro UV/Vis Spectrophotometer
Part number 80-2112-00 / 01 / 02 / 03
Serial number 79000 onwards
David Parr
Managing Director
Biochrom Ltd
OPERATION 3
Introduction 3
Using the Instrument Display and Keypad 4
Customisation of the instrument menu 5
Basic Modes of Use 6
Enhanced Modes of Use 10
Method storage, recall and deletion 18
SET-UP 19
Menu customisation, access code and methods 19
Lamp settings 20
Display contrast and instrument output 20
ERROR MESSAGES 21
OUTPUT OF RESULTS 22
Use with parallel printer 22
Use with chart recorder 22
Use with PC 22
ACCESSORIES 23
Lamps, consumables and other items 23
MAINTENANCE 24
After Sales Support 24
Lamp Replacement 24
Deuterium Lamp Warranty (Ultrospec 1100 pro) 26
Fuse replacement 26
Cleaning and general care of the instrument 26
APPENDIX 27
Equation entry using the Multi Wavelength mode 27
SPECIFICATION 28
Warranty 30
Unpacking, Positioning and Installation
• Inspect the instrument for any signs of damage caused in transit. If any damage
is discovered, inform your supplier immediately. Check the position of the metal
lamp bracket inside the lamp access area.
• The instrument must be placed on a hard, flat bench or table that can take its
weight (6 kg) such that air is allowed to circulate freely around the instrument.
• Ensure that the cooling fan inlets and outlets are not obstructed; position at
least 2 inches from the wall.
• This equipment must be connected to the power supply with the power cord
supplied and MUST BE EARTHED (GROUNDED). It can be used on 90 - 240V
supplies.
• Switch on the instrument. Prior to calibration, the display asks you to check that
the cell compartment is clear. The purpose of this is to indicate the use of the
function soft keys, and how they are associated with the options presented at
the bottom of the display; F2 represents OK in this instance (this display can be
disabled in Set-up if required). The calibration stages are indicated in sequence
(- for checking, ü for OK, û for Fail).
There are a number of warning labels and symbols on your instrument. These are
there to inform you where potential danger exists or particular caution is required.
Before commencing installation, please take time to familiarise yourself with these
symbols and their meaning.
WARNING WARNING
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OPERATION
Introduction
Your spectrophotometer:
• can be linked via a serial interface adapter lead to a PC for download of results to
spreadsheet, and subsequent inclusion in a laboratory information management
system (LIMS)
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Using the Instrument Display and Keypad
The back-lit liquid crystal display has large characters which are easily visible, useful
if a group of students are gathered around for a demonstration, for example. The
keypad is a spill proof membrane that is very hard wearing.
The instrument is easy to use, with function select / entry soft keys on the keypad
(F1, F2 and F3) being situated directly below the corresponding option on the
display; these keys are used in conjunction with on-screen prompts.
On the absorbance home page, for example, concise help text is available at the push
of the F1 key, whereas Menu and Set-up are accessed by F2 and F3, respectively. On
other displays, the purpose of the keys changes, but this is clearly indicated; for
example, F3 acts as the “accept” option on parameter entry displays and next page (if
further options exist) in the Menu and Set-up displays.
Pressing the red stop key acts as an escape mechanism in most situations.
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Press:
• to print result
To customise the instrument, refer to Set-up > Menu for further details.
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Basic Modes of Use
Absorbance
% Transmission
Transmission mode measures the amount of light that has passed through a sample
relative to a blank (this can be air), but displays the result as a percentage. The
procedure is as follows:
Concentration
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Insert samples as required and record the concentrations.
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Time Intervals
Simple kinetics studies for teaching laboratory experiments can be readily performed.
The wavelength of interest is entered together with the time interval at which
absorbances are to be read; the option of having a reference reading prior to the run
is available. A count down facility indicates the time remaining until the next
measurement. To end an experiment, the stop key is pressed. The procedure is as
follows:
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Wavescan
An absorption spectrum can be obtained from your instrument; this enables simple
identification of peak height and position. A reference scan has to be obtained first
since there is no stored baseline. The procedure is as follows:
Use the 3 (F1) and 4 (F3) keys to move the cursor in order to identify peak height
and position.
To zoom in on a region, press F2 followed by the start and end wavelengths (the
instrument will zoom to the nearest 10, 20, 50 or 100 nm).
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Enhanced Modes of Use
Standard Concentration
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Standard Curve
Select whether cubic spline or linear regression fit of the data points is required
Enter appropriate wavelength
Input the number of standards to be used:
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required to enter standard 1. If using duplicates, enter the same concentration
twice; 2 duplicates of 3 different concentration equals 6 standards.
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Reaction Rate
Reagent test kits are routinely used for the enzymatic determination of compounds in
food, beverage and clinical laboratories by measuring NAD / NADH conversion at
340 nm. The change in absorbance over a specified time period can be used to
provide useful information when an appropriate factor, defined in the reagent kit
protocol, is applied.
Note that reaction rate and enzyme activity can be calculated if the factor used takes
account of the absorbance difference per unit time, as opposed to the absorbance
difference per se.
The correlation (quality of line fit) is calculated from 10 equally spaced absorbance /
time points during the course of the experiment. The procedure is as follows:
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Multi Wavelength Equation Entry
Write the equation out in front of you, ensuring there are no syntax errors!
The available equation operators are:
A@1 Absorbance at wavelength 1. Enter required wavelength using keypad.
( ) + - * /
K1 Factor applied to absorbance at wavelength 1. Enter using keypad.
C1 Constant (dilution or other). Enter using keypad. Note that C1 can be
applied several times, using different numerical values each occasion.
! Use if a sequence of Absorbance values only is required Enter !A@1 A@2
etc
Note that Factor and Constant can only have 5 characters, including the decimal
point; thus 12.259 is not allowed, whereas 0.302 is.
The maximum length of equation that can be accommodated is 60 characters in
length, where the absorbance at wavelength and factor are 3 and 5 characters,
respectively, and the equation operators are 1 character.
Press Next (F1) to obtain the required parameter, using the keypad for absorbance
values and factors, as appropriate.
Press F2 to select the parameter and move on to the next one.
Repeat this procedure until the equation is entered.
Note that if you make an error, the ← key on the keypad will remove the last entry.
Press F3 to enter the equation once it has been input correctly.
Insert reference, press key. A set reference at each of the required wavelengths
is taken.
If you wish to save as a method, go to set-up (F3)
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Press F2 to proceed to next sample
If recalling as a method, set reference before measuring samples.
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Nucleic Acid Quantification (Ultrospec 1100 pro)
Nucleic acids can be quantified at 260 nm because it is well established that a
solution of DNA or RNA with an optical density of 1.0 has a concentration of 50 or
40 µg/ml, respectively, in a 10mm pathlength cell. Oligonucleotides, as a rule of
thumb, have a corresponding factor of 33 µg/ml, although this does vary with base
composition.
Background correction at a wavelength totally separate from the nucleic acid and
protein peaks at 260 and 280 nm, respectively, is sometimes used to compensate for
the effects of background absorbance. The wavelength used is 320 nm and it can
allow for the effects of turbidity, high absorbance buffer solution and the use of
reduced aperture cells.
The instrument calculates concentration, displays 260/280 and 260/230 ratios, and
compensates for dilution and use of cells that do not have 10mm pathlength (2mm).
We do not recommend the use of cells containing less than 70µl of solution in this
instrument (the microvolume cell, 80-2103-69, is ideal for Nucleic Acid Quantification).
The procedure is as follows:
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Method storage, recall and deletion
After defining parameters in any of the above modes, and prior to measuring a
sample, entry to Set-up using the F3 function key provides the opportunity to store
the parameters currently loaded as a method. This option is password protected, and
up to 9 methods can be saved; refer to Set-up > Methods for further details.
When recalling a stored method from the menu, the option to print the method
parameters is presented by pressing 1; press 2 to continue with the selected method.
Print the method to confirm that it is the method you require, if necessary. Once a
method has been recalled, you can set reference before running samples.
If method parameters are incorrect, they cannot be changed – the method has to be
erased (deleted), re-entered and then re-stored (re-saved). To remove a method, refer
to Set-up > Methods.
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SET-UP
After selecting the set-up option (F3) there is an initial information screen, as shown
below. Press F2 (OK) to return to the absorbance home page. Press F1 to recalibrate
the instrument.
To access the set-up page press F3 again. A password is required; the default is
4110 or 4140, but this can be changed.
Three displays are available: Menu customisation, access code and methods
Lamp settings
Display contrast and instrument output
1 : Menu Press 1 to obtain a list of all the modes. These can be enabled
or disabled as required by pressing the relevant number on the
keypad. Disabled options are not shown on the main menu
display.
2 : All Menu Press 2 to show disabled options from above as greyed out text
on the main menu, even though they cannot be selected.
3 . Access Code Press 3 for the possibility to change the password from the
default to another 4 digit number. Enter the current password
(Access Code), then the new one (Access Code #1) and confirm
the new one (Access Code #2). If you forget the password,
contact your supplier.
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4 : Methods Press 4 to have the choice of either storing a new method
after defining parameters or erasing an existing method.
Press 1 to store the method in the next available method
storage space (maximum is 9). Methods are stored in the
instrument EEPROM, the process may take a few seconds.
Press 2 to erase a method; the method number has to be
entered.
Method parameters can be printed out when the stored
method is selected from the menu.
Lamp settings
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ERROR MESSAGES
Reset to defaults Memory was corrupted in some way and re-set to defaults.
Display options and methods need to be re-entered.
UV lamp fail UV lamp failed to strike. May need replacing – check lamp
hours (Ultrospec 1100 pro)
Vis lamp fail Visible lamp failed to strike. May need replacing – check
lamp hours
Beam blocked Something is in the way of the beam – check sample
compartment area
Wavelength error A calibration failure or corruption has caused the instrument
to go an invalid wavelength. May need service engineer.
Lamps overheating The thermal sensor on the lamp cover has detected a
temperature in excess of its limits – call service engineer.
PSU overheating PSU thermistor is indicating a temperature in excess of 70°C
– call service engineer.
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OUTPUT OF RESULTS
Use with PC
NOTE: A standard serial interface will not work.
1) Download to Spreadsheet
The serial interface adapter lead (80-2109-02) is required; it is also supplied with
Spreadsheet Interface Software for direct download to Excel. This macro is supplied
on a floppy disc together with instructions for installation and use.
2) Use with Hyperterminal
The serial interface adapter lead (80-2109-02) is required; ensure output to serial is on
in Set-up. The ASCII stream is output at 19,200 Baud via the 25 way D connector on
the rear panel, and can be picked up by a PC with Windows installed. Use the
Hyperterminal emulator in Accessories to pick this up (settings are Handshake None,
19,200 Baud, 1 stop bit, 8 data bits, 0 parity, Comm port depends on which port the
lead is connected to). Output is automatic if the interface lead is connected to the
instrument.
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ACCESSORIES
Each accessory is supplied integrated into its own sample compartment for ease of
fitting and cleaning.
Easy to fit - when changing accessory / sample compartment, snap the old one
out and the new one in.
Easy to clean - take the whole assembly out and run it under the tap.
Contact your supplier for details on our range of disposable, UV silica and glass
cells.
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MAINTENANCE
We supply support agreements that help you to fulfil the demands of regulatory
guidelines concerning GLP/GMP.
♦ Preventative maintenance
♦ Certification
When using calibration standard filters, insert such that the flat surface is facing
away from the spring end of the cell holder
Lamp Replacement
Replacement lamps are available from your supplier using the following part numbers:
The design of the lamp area is such that users are able to change their own lamps.
No lamp alignment is necessary as the lamps are pre-aligned at manufacture.
The lamps become very hot in use. Ensure they cool before changing them.
Do not touch the optical surfaces of either lamp with your fingers (use tissue); if
touched, the area should be cleaned with iso-propanol.
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To replace a lamp proceed as follows:
1) Switch off the instrument, remove the sample from the cell holder and
disconnect the power supply cord.
2) Locate the lamp access cover at the back of the instrument, unscrew the cover
and remove.
3) Move the metal bracket sideways, slide the lamp plate assembly out and
unplug the connector.
- if the tungsten lamp has failed, the replacement should be inserted onto the
plate, pushing it all the way down into its holder.
- if the deuterium lamp has failed, insert the old tungsten lamp onto the plate as
above and then replace the whole assembly with the new one.
4) Reconnect the cable connector and slide the lamp plate in until it locates,
checking that the cable or connector does not interfere with the relocation.
5) If you have difficulty in sliding the lamp assembly back into position hold the
connector down and push the lamp plate until it locates correctly.
6) Replace the lamp access cover.
7) Reconnect the power supply cord and switch the instrument on.
8) Reset the lamp life to zero by:
F3 Set-up → F3 Set-up → enter password → F3, F3 → select 4 → F3
(ü), → select which lamp life is to be changed to zero.
Exit this screen by pressing the key
Exit set-up by pressing the key.
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Deuterium Lamp Warranty (Ultrospec 1100 pro)
Fuse replacement
Switch off the instrument and disconnect the power supply cord. The fuse holder
can only be opened if the power supply plug has been removed, and is located
between the power input socket and the on/off switch on the back panel of the
instrument.
Place fuses (2A, 5mm x 20mm, FST) into the fuse holder and slide back into position.
Fuses are not normally consumed in an instrument’s lifetime. If they blow repeatedly,
contact your supplier.
External cleaning
Switch off the instrument and disconnect the power cord.
Use a soft damp cloth.
Clean all external surfaces.
A mild liquid detergent may be used to remove stubborn marks.
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APPENDIX
Always write out the equation in front of you before using this mode.
Step by step entry of the following equation is shown in the example below:
Note that if you make an error, the ← key on the keypad will remove the last entry.
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SPECIFICATION
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Specifications are measured after the instrument has warmed up at a constant
ambient temperature and are typical of a production unit. As part of our policy of
continuous development, we reserve the right to alter specifications without notice.
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Warranty
Your supplier guarantees that the product supplied has been thoroughly tested to
ensure that it meets its published specification. The warranty included in the
conditions of supply is valid for 12 months only if the product has been used
according to the instructions supplied. They can accept no liability for loss or
damage, however caused, arising from the faulty or incorrect use of this product.
This product has been designed and manufactured by Biochrom Ltd, 22 Cambridge
Science Park, Milton Road, Cambridge CB4 0FJ, UK.
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