POD BOOKLET As Appears On Moodle Fall 2023
POD BOOKLET As Appears On Moodle Fall 2023
Semester 3 Year 2
Block
Pathogenesis of Diseases
Number of Weeks: 11
Dates: October 9, 2023 – December 26, 2023
Block Director: Dr. Atef Shibl
Co-Director: Dr Dileep Rohra
Administrative Coordinator: Muntaser Qawas
Contents
Course Description2
PBL Cases
Teaching Faculty
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Course Description
This is an 12 week course integrating the basic aspects of Immunology, Microbiology,
Pathology, and Pharmacology. Although several aspects are peculiar to each individual
discipline, integration will be sought whenever possible to present the students a
homogeneous view of the different aspects constituting the basic mechanism of diseases
essential to approach the clinical practice. Several interactive occasions in the form of large
group discussion and clinico-pathological conferences will be arranged. To distribute the
burden of assessment, a mid-term exam will be arranged and suitable review sessions will be
offered. As every year, few improvements have been made as a result of feedback from the
students as well as the faculty. New PBL cases have been written. Practically-oriented
activities either hands on or virtual are also included and these will be reflected in the exam
giving more weightage to laboratory-oriented competence. Now all disciplines concur fully to
integration, although there is still room for improvement. The aim is to make the course more
enjoyable and more educationally sound.
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L2. Innate • Outline the differences between the innate and adaptive immune
Immunity I. system.
• Identify the anatomical, humoral and cellular components of the
innate immune system.
• Appreciate the role of cytokines as bridges of innate and adaptive
immunity.
• Describe the process of recognition of non-self in innate
immunity.
• Describe the process of phagocytosis and intracellular killing.
• Learn about the nature and function of natural killer cells
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L5. Bacterial • Discuss the stages of the bacterial growth curve and the types of
growth and oxygen utilization i.e. aerobic, anaerobic, facultative anaerobic,
metabolism and micro-aerophilic.
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L3,4 Cell
injury and cell • List and describe causes and mechanism of cell injury.
Pathology death Discuss reversible vs. irreversible cell injury. Describe the
cellular adaptations following cell injury
L3. Pharmaco-
kinetics II: • Define the terms “half-life”, “steady state concentration” &
Pharmacology Metabolism, “volume of distribution” of a drug.
distribution • Discuss the method of calculating volume of distribution,
and excretion loading dose & maintenance dose of drug.
• Discuss the clinical situations where therapeutic drug
monitoring of a drug is essential.
Pathology L5. Cell death I. • Discuss cell death, necrosis and its types, and compare
Necrosis necrosis with apoptosis
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L4. Routes of
Pharmacology drug • Define the term route of administration.
administration • List the major routes of administration & the advantages &
disadvantages associated with each route.
• Identify the factors that can influence the choice of route of
administration.
L5. t½, Vd &
Therapeutic • Define the terms “half-life”, “steady state concentration” &
Drug “volume of distribution” of a drug.
Monitoring • Discuss the method of calculating volume of distribution,
loading dose & maintenance dose of drug.
• Discuss the clinical situations where therapeutic drug
monitoring of a drug is essential.
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pharmacology.
Lab. activity 3: • Learn the techniques for the culture, staining and
Laboratory identification of Gram positive bacteria
Diagnosis of
Gram positive
bacteria
Pathology L7. Acute • Describe the causes and cardinal features, basic mechanisms,
Inflammation local and systemic effects of acute inflammation.
• Describe the role of blood vessels in acute inflammation
L8. Acute • Describe the role of different leukocytes and chemical
Inflammation: mediators in acute inflammation
Chemical • Describe the morphological patterns of acute inflammation
mediators • Describe the systemic effects of inflammation
Pharmacology L9. Cell wall • Classify the cell wall synthesis inhibitors.
synthesis • Discuss the structure-activity relationship of b lactam
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inhibitors antibiotics.
• Revisit the physiology of cell wall synthesis & explain the
mechanism of action of b lactam antibiotics & vancomycin.
• Describe the mechanisms of drug resistance against b lactam
antibiotics.
• Discuss the role of b lactamase inhibitors in combination with
b lactam antibiotics.
• Describe the clinical uses & adverse effects of b lactam
antibiotics and vancomycin.
Immunology L6.MHC and • Discuss the role of the major histocompatibility complex in
Antigen antigen presentation.
Processing • Study the production, structure and function of Class I and
Class II MHC molecules.
• Describe the different pathways of antigen presentation for
intracellular and extracellular antigens.
Week 5. Inflammation
Microbiology L13,14. • Discuss important basic concepts in parasitology such as
Protozoa I vectors, host, and reservoir of infection.
and II • Discuss the classification of major groups of protozoa.
• Discuss the life cycle, role of different vectors, reproduction,
stages (trophozoites and cysts) of selected medically relevant
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protozoa.
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Pathology L11,12. • Describe the cell cycle, stem cells and mechanisms controlling
Tissue repair; and regulating cell proliferation in tissue response to injury
regeneration and repair.
healing and • Describe how tissue responds to injury and mechanisms of
fibrosis repair, tissue regeneration and wound healing and fibrosis
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Pathology L14. Shock • Describe mechanisms of hemorrhage and shock; discuss the
causes and types of shock
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L11. T-B cell • Describe the role of follicular T helper cells in providing help
Immunology interactions to B2 cells for antibody production and isotype switching
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infectants
and
sterilization
Lab activity • Investigate the approaches for the laboratory diagnosis of fungal
7. Fungi infections.
Pharmacology L21. • Describe the synthesis, storage, release, receptor distribution and
Antifungal organ system effects of histamine.
drugs • Explain the important pharmacokinetic properties,
pharmacological effects, clinical uses, adverse effects and
L22. Drugs important drug-drug interactions of drugs acting on histamine
acting on receptors.
autacoids
• Define allergen and type I hypersensitivity.
• Understand the roles of IgE and mast cells in allergy.
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Lab activity • Explore the approaches for the laboratory diagnosis of fungal
8. Mycology infections
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Immunology L15.
Primary • Describe the mechanisms of primary immune deficiency
Immune • Describe the spectra of primary immune deficiency disease
Deficiency • Explore the therapeutic approaches for the treatment of primary
Diseases immune deficiency diseases
L16.
Vaccinology • Describe the principles of vaccine development
• Understand the different types of vaccines
• Discuss the composition of vaccine preparations
• Discuss the principle of herd immunity
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Virology community
IV:Clinically • Describe the difference between epidemics and pandemics
relevant • Define viruses which have created epidemics recently and those
viruses which are predicted to cause epidemics in the near future
Final Exam
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The Professional Skills Course would run concurrently with this block. The Block Director
for Professional Skills is Dr. Muhammad Zafar. Any queries about the course may kindly be
directed to him.
Office: 7687
E-mail: mzafar@alfaisal.edu
Professional Skills activity will take place on Mondays and Thursdays of every week.
For details on objectives, scheduling, group distribution, attendance and evaluation etc.
please refer to the PRO234 course booklet uploaded at Alfaisal University Learning Portal
(https://elearning.alfaisal.edu/login/index.php).
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PBL Cases
1. Students will be asked to evaluate the PBL case and the facilitator ( evaluation form will be
handed to them by the end of the case/block)
2. Acquisition of PBL learning objectives can be assessed in the exam as MCQ or SAQ as
appropriate according to Block Director
3. PBL evaluation, represent the continuous assessment and carry 10% of total marks.
4. The students’ performance in the PBL sessions shall be evaluated upon the following points.:
PBL Session 1:
Score from 1-10 is awarded for each virtue while 10 is the strongest degree of agreement
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Respecting all view points and Balanced Participation: (in both sessions)
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*The final exam is a comprehensive exam and it will include all topics covered in the
block.
Muntaser Qawas
mqawas@alfaisal.edu
011-2157736
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