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BIOLOGY
PROJECT ON
HUMAN GENETIC MODIFICATION PRESENTED BY: M.GHAJHA PRIYA XII-A1 BONAFIDE CERTIFICATE
This is to certify that this is a Bonafide
Record of Biology Project work done by
M.Ghajha Priya of Class XII and section A1 during the year 2024-2025 in Velammal Bodhi Campus, Anuppanadi, Madurai.
Teacher Incharge, Principal,
Internal Examiner, External Examiner,
ACKNOWLEDGEMENT First of all, I wholeheartedly thank the almighty who blessed me with very supportive people around me. I would like to express my special thanks of gratitude to my Biology Teachers Mr.Rajasekaran and Mr.Karuppasamy for their guidance and support to complete this project on time. I would like to extend my gratitude to the Principal Sir Mr.Balamurugan for providing timely support and required facilities. I thank our Chairman of Velammal Bodhi Campus, Anuppanadi, Madurai for providing us ample facilities to learn many things while doing this investigatory project and to complete it on time. Finally, I would like to thank my Parents who extended their helping hands to finish and finalise this project. INTRODUCTION
Human genetic modification (or “gene editing”) can
be used in two very different ways. Somatic genome editing changes the genes in a patient’s cells to treat a medical condition. A few gene therapies are approaching clinical use but remain extraordinarily expensive. By contrast, heritable genome editing would change genes in eggs, sperm, or early embryos to try to control the traits of a future child. Such alterations would affect every cell of the resulting person and all subsequent generations. For safety, ethical, and social reasons, heritable genome editing is widely considered unacceptable. It is prohibited in 70 countries and by a binding international treaty. Nevertheless, in 2018 one scientist announced the birth of twins whose embryos he had edited. This reckless experiment intensified debate between advocates of heritable genome editing and those concerned it could exacerbate inequality and lead to a new, market-based eugenics. Genome editing is a way of making changes to specific parts of a genome. Scientists have been able to alter DNA since the 1970s, but in recent years, they have developed faster, cheaper, and more precise methods to add, remove, or change genes in living organisms. Researchers are working to develop therapies that use gene editing to treat children or adults for a range of conditions, including sickle cell, hemophilia, and some forms of cancer and blindness. Since 2015, a few laboratories have been experimenting with a far more controversial use of CRISPR: editing the genomes of early human embryos, eggs, and sperm. If edited embryos are used to start a pregnancy, the changes affect every cell in the body of any resulting child, that child’s offspring, their offspring, and so on. Dozens of countries already prohibit any attempt to start a pregnancy with edited embryos, yet some scientists seem eager to proceed. In November 2018, researcher He Jiankui from Shenzhen, China announced the birth of the first gene- edited babies: twin girls publicly referred to as Lulu and Nana. In a reckless and widely condemned experiment, He had edited the DNA of two embryos and used them to start a pregnancy. The babies were born prematurely and their current health status is unknown. These utterly unethical experiments have pushed the issue of human genome editing to the forefront of media, scientific, and public discussion and debate. Any discussion of how we might use this technology in the future needs to consider the serious societal consequences of human genome editing. This includes examining the rise of vast economic inequalities and the resurgence of overt xenophobia and racism in many parts of the world. It also includes acknowledging our eugenic histories and the present-day systemic oppression of women, people of color, Indigenous people, LGBTQ people, and people with disabilities, particularly as they relate to reproduction and ideas about who is “fit” to reproduce. Human genome editing is not just a scientific issue. It is a political and social justice issue that intersects with the concerns of multiple movements, including disability rights, LGBTQ rights, reproductive rights and justice, racial justice, environmental justice, and health justice. Read on to learn more about human genome editing and why everyone should have a say in the decisions we make about whether and how to use this powerful technology. What is CRISPR?
CRISPR is a gene editing technology that allows
scientists to make changes to the DNA of living organisms more precisely and inexpensively than before. CRISPR stands for clustered regularly interspaced palindromic repeats. These segments of DNA occur naturally in bacteria, where they store information that helps recognize invading viruses. Associated enzymes, such as Cas9, then cut viral DNA out of the bacterial genes. Scientists discovered that they can adapt CRISPR-Cas molecules to search for a specific DNA sequence and cut precisely at that point — not just in bacteria, but in plant, animal, and human cells, too. They can also provide a new DNA sequence for the cell to use when it repairs the cut. CRISPR-Cas is often compared to the “find and replace” function in a word processor, but this metaphor of gene “editing” can make it sound more precise than it actually is. CRISPR sometimes mis-recognizes a DNA sequence that is similar to the one it’s looking for and cuts in the wrong place, causing “off-target mutations.” Other times it might cut in the right place, but cause mistakes, or “indels,” where DNA is incorrectly inserted or deleted. Gene Therapy: Changing genomes to treat disease There are two distinct ways gene editing might be used in humans. Gene therapy, or somatic gene editing, changes the DNA in cells of an adult or child to treat disease, or even to try to enhance that person in some way. The changes made in these somatic (or body) cells would be permanent but would only affect the person treated. One way this is already being done is by editing a person’s immune cells to help them better fight cancer. Clinical trials will soon be underway to use CRISPR to edit blood cells as a treatment for sickle cell anemia and other blood disorders. Gene therapy raises many of the same social and ethical issues as other high-tech medical treatments, including ethical research practices, safety and effectiveness, unequal access to expensive treatments, and how we allocate resources, but is widely supported as a promising way to treat disease. In 1990,a 4-year-old girl became the first gene therapy success story. She was born with a severe combined immunodeficiency (SCID) due to lack of the enzyme adenosine deaminase (ADA). Without ADA, her T cells died off, leaving her unable to fight infections. Injections of a synthetic ADA enzyme helped, but only temporarily. The first paper, in 1984, showing that a virus could insert genes into cells. Doctors decided to deliver a healthy ADA gene into her blood cells, using a disabled virus that cannot spread in the body. Their success spurred more trials in the 1990s for the same form of SCID. Now in her 30s, de Silva is active in the rare disease community. European researchers in the 1990s focused on SCID- X1, another form of SCID linked to the X chromosome. They reported the first cures in 2000, but within several years, five of the 20 treated children developed cancer. The viral vector that delivered the gene to their T cells had also activated an oncogene, triggering leukemia. The U.S. saw another early setback: the 1999 death of 18-year-old Jesse Gelsinger, after receiving gene therapy for a rare metabolic disorder. In his case, the viral vector caused a fatal immune response. Gene therapy came to a halt. Germline Editing: Changing the genomes of future generations
But there is a much more controversial way that human
gene editing could be used. In germline modification, gene editing would change the DNA of embryos, eggs, or sperm. Because germline DNA is passed down to all future generations, any changes — whether they had beneficial or harmful effects — would be as well. Some have proposed that germline editing could be used to prevent inherited diseases, but this would carry unacceptably serious safety, ethical, and social risks. And it’s unneeded, since we already have safe and effective ways to prevent passing on an inherited disease. People at risk can use preimplantation genetic diagnosis (PGD), a way to screen embryos created through in vitro fertilization (IVF) and select one that is unaffected; this allows parents to have a genetically related child without passing on an inherited disease. PGD certainly raises its own ethical questions, particularly around disability rights and justice, but it poses fewer safety and societal risks than germline editing would. Recently, the US National Academy of Sciences and National Academy of Medicine released their report on recommendations for human genome editing. The committee that authored the report comprised research scientists, clinicians, regulatory agents and bioethicists, and the goal was to reach consensus guidelines for responsible applications of human genome editing in the laboratory and the clinic. This report clearly lays out the scientific and social implications of human genome editing and proposes guiding principles for its use. We strongly support the advance of science while at the same time agreeing that it is prudent to proceed with caution, particularly with regard to rapidly developing technologies that have the potential to have a profound impact on research, medicine and society.
The capacity to edit genes has existed for decades, and
genetic modification is common practice in the laboratory. The reason for the heightened attention and concern now is that technological advances have enabled the precise editing of genomes at unprecedented speed and scale. Zinc-finger nucleases, TALENs and, now, the CRISPR–Cas9 system have revolutionized scientific discovery. As such, the applications of these powerful tools must be thoroughly discussed and debated. While applications of genome editing to laboratory organisms, crop plants, domestic animals and disease vectors come with different considerations of varying complexity and consequence, the use of genomic editing to introduce potentially heritable alterations in humans should be in a separate category, subject to greater scrutiny and regulation.
We wrote in these pages last year (Nat. Genet. 48, 103,
2016) that genome editing in crop plants should be regulated on the basis of the end product, not the process by which genetic mutations are introduced. Genome editing is merely a faster and more accurate method than classical breeding and is not fundamentally different. While it may be an appropriate approach for plants and domestic animals, a distinct line can be drawn between these applications and ones involving genetic modification of the human germ line, which justify greater oversight. Although there are regulations for gene therapy, the exceptional versatility and precision of genome editing elevate the possibilities of not only what modifications can be made but also how quickly and accurately they can be introduced. Unintended or long-term consequences of editing humans or human germ cells and embryos have the potential to seriously affect not only the subjects themselves, but also their progeny.
We agree with the National Academies'
recommendations that somatic genome editing should fall under existing regulations that apply to human clinical research. Correcting mutation through the germ line is different in kind, not degree. This is due to the fact that changes introduced into germ cells are heritable through subsequent generations. Therefore, these alterations have effects that go beyond a single individual. Data are lacking on the long-term consequences of germline genome editing. Off-target effects and lack of consent are two of the main issues to consider. The National Academies have recommended that germline genome editing trials be permitted, but only when compliant with all standards for human clinical trials along with additional rigorous oversight. They stipulate that such research be restricted to the treatment or prevention of disease. Any other application (for example, genetic 'enhancement') should not be allowed to proceed at this time.
This committee strongly recommended that the public
be informed of progress already made in human genome editing as well as any future developments. We think it is especially important for scientists to make public education and outreach an integral part of their research and to have discussions with relevant parties, including members of the public, regulatory agencies and medical professionals. It is critical that the social license to operate these technologies for therapy not be infringed by premature experimentation on heritable genome engineering for proof of principle or academic priority. The future safety of germline edits is an important area for research that we think can readily be explained to the public.
Further, there are currently few genetic arguments for
the necessity of correcting the genetic material of future generations given pre-implantation diagnosis of monogenic conditions. Therefore, we think it is imperative to discuss future concepts of genome editing that could be considered acceptable therapies. One might discuss a panel of deleterious mutations lacking compensating selective advantages that would be justified for multiplex removal from all in vitro– fertilized (IVF) embryos. If germline editing technology could achieve this end routinely and safely, without genotypic discrimination, it would then be as ready for implementation as a panel of recommended vaccinations.
One can be supportive of scientific advance and at the
same time advise reasonable caution in the adoption of powerful new technologies. Much more needs to be known about the safety and consequences of human germline genome editing before it can be considered for medical application. Additionally, the motivation for adopting the technology, together with legal and ethical issues, needs to be thoroughly discussed and revisited as more information becomes available. Allowing for clinical trials to proceed in this area, under strict oversight and without regional loopholes in legislation, will help answer some outstanding questions and usher in this new era with forethought and responsibility. THE HUMAN GENOME PROJECT
Ofcourse, genetic modification in humans would have
been a much difficult if it weren’t for the human genome project. The Human Genome Project (HGP) was an international scientific research project with the goal of determining the base pairs that make up human DNA, and of identifying, mapping and sequencing all of the genes of the human genome from both a physical and a functional standpoint. It started in 1990 and was completed in 2003. It remains the world's largest collaborative biological project. Planning for the project began in 1984 by the US government, and it officially launched in 1990. It was declared complete on April 14, 2003, and included about 92% of the genome. Level "complete genome" was achieved in May 2021, with only 0.3% of the bases covered by potential issues. The final gapless assembly was finished in January 2022. Funding came from the United States government through the National Institutes of Health (NIH) as well as numerous other groups from around the world. A parallel project was conducted outside the government by the Celera Corporation, or Celera Genomics, which was formally launched in 1998. Most of the government-sponsored sequencing was performed in twenty universities and research centres in the United States, the United Kingdom, Japan, France, Germany, and China, working in the International Human Genome Sequencing Consortium (IHGSC). The Human Genome Project originally aimed to map the complete set of nucleotides contained in a human haploid reference genome, of which there are more than three billion. The genome of any given individual is unique; mapping the human genome involved sequencing samples collected from a small number of individuals and then assembling the sequenced fragments to get a complete sequence for each of the 23 human chromosome pairs (22 pairs of autosomes and a pair of sex chromosomes, known as allosomes). Therefore, the finished human genome is a mosaic, not representing any one individual. Much of the project's utility comes from the fact that the vast majority of the human genome is the same in all humans. The Human Genome Project was a 13 year-long publicly funded project initiated in 1990 with the objective of determining the DNA sequence of the entire euchromatic human genome within 13 years.The idea of such a project originated in the work of Ronald A. Fisher, whose work is also credited with later initiating the project. In May 1985, Robert Sinsheimer organized a workshop at the University of California, Santa Cruz, to discuss the feasibility of building a systematic reference genome using gene sequencing technologies. In March 1986, the Santa Fe Workshop was organized by Charles DeLisi and David Smith of the Department of Energy's Office of Health and Environmental Research (OHER). At the same time Renato Dulbecco, President of the Salk Institute for Biological Studies, first proposed the concept of whole genome sequencing in an essay in Science. The published work, titled "A Turning Point in Cancer Research: Sequencing the Human Genome", was shortened from the original proposal of using the sequence to understand the genetic basis of breast cancer. James Watson, one of the discoverers of the double helix shape of DNA in the 1950s, followed two months later with a workshop held at the Cold Spring Harbor Laboratory. Thus the idea for obtaining a reference sequence had three independent origins: Sinsheimer, Dulbecco and DeLisi. Ultimately it was the actions by DeLisi that launched the project. The fact that the Santa Fe Workshop was motivated and supported by a federal agency opened a path, albeit a difficult and tortuous one, for converting the idea into public policy in the United States. In a memo to the Assistant Secretary for Energy Research Alvin Trivelpiece, then-Director of the OHER Charles DeLisi outlined a broad plan for the project. This started a long and complex chain of events which led to approved reprogramming of funds that enabled the OHER to launch the project in 1986, and to recommend the first line item for the HGP, which was in President Reagan's 1988 budget submission, and ultimately approved by Congress. Of particular importance in congressional approval was the advocacy of New Mexico Senator Pete Domenici, whom DeLisi had befriended. Domenici chaired the Senate Committee on Energy and Natural Resources, as well as the Budget Committee, both of which were key in the DOE budget process. Congress added a comparable amount to the NIH budget, thereby beginning official funding by both agencies. Trivelpiece sought and obtained the approval of DeLisi's proposal from Deputy Secretary William Flynn Martin. This chart was used by Trivelpiece in the spring of 1986 to brief Martin and Under Secretary Joseph Salgado regarding his intention to reprogram $4 million to initiate the project with the approval of John S. Herrington. This reprogramming was followed by a line item budget of $13 million in the Reagan administration's 1987 budget submission to Congress. It subsequently passed both Houses. The project was planned to be completed within 15 years. In 1990, the two major funding agencies, DOE and the National Institutes of Health, developed a memorandum of understanding in order to coordinate plans and set the clock for the initiation of the Project to 1990. At that time, David J. Galas was Director of the renamed "Office of Biological and Environmental Research" in the U.S. Department of Energy's Office of Science and James Watson headed the NIH Genome Program. In 1993, Aristides Patrinos succeeded Galas and Francis Collins succeeded Watson, assuming the role of overall Project Head as Director of the NIH National Center for Human Genome Research (which would later become the National Human Genome Research Institute). A working draft of the genome was announced in 2000 and the papers describing it were published in February 2001. A more complete draft was published in 2003, and genome "finishing" work continued for more than a decade after that. The $3 billion project was formally founded in 1990 by the US Department of Energy and the National Institutes of Health, and was expected to take 15 years. In addition to the United States, the international consortium comprised geneticists in the United Kingdom, France, Australia, China, and myriad other spontaneous relationships. The project ended up costing less than expected, at about $2.7 billion (equivalent to about $5 billion in 2021). Two technologies enabled the project: gene mapping and DNA sequencing. The gene mapping technique of restriction fragment length polymorphism (RFLP) arose from the search for the location of the breast cancer gene by Mark Skolnick of the University of Utah, which began in 1974. Seeing a linkage marker for the gene, in collaboration with David Botstein, Ray White and Ron Davis conceived of a way to construct a genetic linkage map of the human genome. This enabled scientists to launch the larger human genome effort. Because of widespread international cooperation and advances in the field of genomics (especially in sequence analysis), as well as parallel advances in computing technology, a 'rough draft' of the genome was finished in 2000 (announced jointly by U.S. President Bill Clinton and British Prime Minister Tony Blair on June 26, 2000). This first available rough draft assembly of the genome was completed by the Genome Bioinformatics Group at the University of California, Santa Cruz, primarily led by then-graduate student Jim Kent and his advisor David Haussler. Ongoing sequencing led to the announcement of the essentially complete genome on April 14, 2003, two years earlier than planned. In May 2006, another milestone was passed on the way to completion of the project when the sequence of the very last chromosome was published in Nature. Understanding the Social and Ethical Risks New technologies often raise ethical questions about their unknown risks and benefits. These questions become especially tricky — and essential — when we are talking about something like human germline editing, which affects future generations who obviously can’t consent to the changes being made to their DNA. What risks would women (who are rarely mentioned in discussions about human gene editing for reproduction) be subject to as the ones who would carry pregnancies started with genetically modified embryos and deliver the resulting children (for themselves or for others)? How could potential parents make informed decisions when there would be unknown health risks that might emerge during pregnancy for the woman and the fetus, epigenetic effects, and health issues that might not develop until adulthood or old age (or even in future generations)? It would be extremely difficult, if not impossible, to ethically conduct the kind of follow-up studies that would be necessary to say that human genome editing is safe enough to use in reproduction. But focusing on these obvious safety risks takes too narrow a view and overlooks the many serious social and ethical risks that germline editing would pose. Imagine wealthy parents being able to purchase enhancements (real or perceived) for their children, and the kind of world that would result if children’s education and life chances were thought to be determined at birth by their DNA. Imagine the long- term consequences of imposing the preferences and biases we hold today on the genes of all future generations. Consider the potential effects on groups that have less power in society and are already discriminated against, including people with disabilities, people of color, and women. Ableism, racism, and reproductive injustices would likely be exacerbated by human genome modification, if it were ever allowed. These and other social inequalities that already shape our lives could rapidly grow worse, and new forms of inequality could be introduced, leading to a new form of eugenics. While it might seem possible to avoid such dire outcomes by limiting the use of germline gene editing to the prevention of serious diseases, this would be extremely difficult. The line between therapy and enhancement is fuzzy and would be nearly impossible to enforce. How would we determine which diseases are serious enough to edit out? And who would decide? There are many disabled people who value their differences as a form of human diversity and do not think they need to be “treated” or “cured.” Allowing just some uses of germline gene editing for reproduction would mean opening the door to all uses. For these reasons, over 40 countries have banned human germline modification. CONCLUSION New forms of human enhancement are increasingly coming to play due to technological development. If phenotypic and somatic interventions for human enhancement pose already significant ethical and societal challenges, germline heritable genetic intervention, require much broader and complex considerations at the level of the individual, society and human species as a whole. Germline interventions associated with modern technologies are capable of much more rapid, large- scale impacts and seem capable of radically altering the balance of humans with the environment. We know now that beside the role genes play on biological evolution and development, genetic interventions can induce multiple effects (pleiotropy) and complex epigenetics interactions among genotype, phenotype and ecology of a certain environment. As a result of the rapidity and scale with which such impact could be realized, it is essential for ethical and societal debates, as well as underlying scientific studies, to consider the unit of impact not only to the human body but also to human populations and their natural environment (systems biology). An important practicable distinction between ‘therapy’ and ‘enhancement’ may need to be drawn and effectively implemented in future regulations, although a distinct line between the two may be difficult to draw. In the future if we do choose to genetically enhance human traits to levels unlikely to be achieved by human evolution, it would be crucial to consider if and how our understanding of humans and other organisms, including domesticated ones, enable us to better understand the implications of genetic interventions. In particular, effective regulation of genetic engineering may need to be based on a deep knowledge of the exact links between phenotype and genotype, as well the interaction of the human species with the environment and vice versa. For a broader and consistent debate, it will be essential for technological, philosophical, ethical and policy discussions on human enhancement to consider the empirical evidence provided by evolutionary biology, developmental biology and other disciplines.