Expression vectors are plasmids or viruses designed to introduce genes into target cells for protein expression. They contain expression signals like promoters and termination sequences. Common vector types include plasmids and viruses, with specialized vectors for different host organisms like bacteria, yeast, plants, and mammals. Examples given are the pET vector used for bacterial expression with T7 promoters, and the pLacZ vector which uses LacZ promoters and can be regulated with IPTG. Purification tags like His, GST, MBP, myc, and FLAG tags are also discussed which facilitate protein purification and detection.
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Expression Vector
Expression vectors are plasmids or viruses designed to introduce genes into target cells for protein expression. They contain expression signals like promoters and termination sequences. Common vector types include plasmids and viruses, with specialized vectors for different host organisms like bacteria, yeast, plants, and mammals. Examples given are the pET vector used for bacterial expression with T7 promoters, and the pLacZ vector which uses LacZ promoters and can be regulated with IPTG. Purification tags like His, GST, MBP, myc, and FLAG tags are also discussed which facilitate protein purification and detection.
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EXPRESSION VECTORS
• The expression vector is usually a plasmid or virus designed for
protein expression in cells. • It is a plasmid engineered to introduce a particular gene into the target cell. • They must have expression signals such as strong promoter, strong termination codon, adjustment of the distance between the promoter and the cloned gene, and the insertion of transcription termination sequence and portable translation initiation sequences. • They are used for molecular biology techniques such as site directed mutagenesis. • Molecular cloning and genetics studies require the use of vectors as a host or carrier system to transfer selected genetic components, namely DNA, to cells or organisms. • Specialized host vectors are available for cloning and expression of a variety of genes from numerous species and of variable size fragments. • Vector technology facilitates library construction, single gene analysis, protein expression, and basic molecular cloning. • The selected vector system is influenced by downstream applications, such as PCR, gene transfection or gene transduction. • Plasmids and viral vectors are two of the most common vector types used. • The development of fluorescence protein marked vectors, like GFP (Green Fluorescent Protein), allows the detection of gene expression within live cells. • Antibiotics resistance, localized expression, engineered selection markers and cloning site size should be taken into consideration when choosing an appropriate vector HOST Expression vector used have specific elements for a particular organisms. • BACTERIAL - Rapid and cheap production . - E.coli and Bacillus subtilis . - lac operator and T7 promoter. - Ex pGEX series . • YEAST - Saccharomyces cerevisiae , pischia pastoris. - Hybrid system. • PLANT - Agrobacterium tumefaciens . - T- DNA sequence, 25kb, selectable marker • MAMMALIAN - Folding of product - Post translational modifications - Specific activity of enymes - Adenoviral vectors, vaccinia vectors, retroviral vectors and baculovirus. EXAMPLES 1. pET vector • Size 5700 bp • These are a family of expression vectors that utilise phage T7 promoters to regulate synthesis of cloned gene products. • It is engineered to take advantage of the features of T7 bacteriophage gene 10 that promote high level transcription and translation. • It is one of the most widely used systems for the cloning and in vivo expression of recombinant proteins in E.coli. 2. pLac Z vector • Lac –Z promoter operator is in frame with lac-Z alpha fragment (the NH3 terminal part of Galactosidase gene. • Multiple cloning sites are found . • The presence of such restriction site sequences should not disturb the functional activity of the protein, which complements with the omega fragment of the Lac-Z produced by the bacterial cell as the complement. • If any gene is placed in proper frame in the MCS the protein expressed will be is fused form. • The expression of the gene can be regulated by IPTG (Isopropyl thio b- Galactoside) 3. pTac vector This has the combination of Trp and Lac-Z promoter –operator elements, which is inducible. It is considered to be a very efficient promoter. PURIFICATION TAGS Peptide sequences that are attached to proteins to facilitate easy detection and purification of expressed proteins. They can also be used to identify potential binding partners for your protein of interest. There is a wide variety of protein tags that can be used to suit your purpose. a) Affinity Tags purify proteins from crude cell lysates. Affinity tagged proteins can be purified by using a specifc affinity resin & antibodies. Some of the most commonly used affinity tags include the following: • Glutathione-S transferase (GST): GST can be used to purify a protein by inserting its coding sequence next to your protein of interest. They will then be expressed as a fusion protein after transcription and translation.. This technique can be used to explain direct protein-protein interactions. • Poly-Histidine tag (His): This tag comprises of 6-8 histidine residues. The relatively small size of His tags makes its integration into expression vectors extremely easy. His-tagged proteins are purified using immobilized nickel, cobalt or zinc ions, and eluted using EDTA or imidazole.
• Calmodulin Binding Protein (CBP): The relatively small size of CBP (4
kDa) makes it ideal for purifying delicate proteins under mild conditions. The tag binds to a calmodulin resin and the proteins can be eluted with a neutral buffer containing low concentrations of EGTA, a calcium chelator.
• Maltose-binding protein (MBP): These tags bind to amylase agarose
and are commonly used to increase the solubility of fusion proteins. b) Epitope Tags They are typically smaller than affinity tags and are readily recognized by antibodies. Due to their relatively small size, they have extremely little or no effect on the structure of the resulting fusion protein. • Myc tag – This tag is a short peptide sequence (EQKLISEEDL ) derived from the c-myc gene product and recognized by numerous commercial antibodies. for isolating protein complexes with multiple subunits. • FLAG tag – Like the Myc tag, the FLAG tag is a popular short peptide tag (DYKDDDDK) for isolating protein complexes with multiple subunits. c) Fluorescent Tags Due to their non-toxic nature, these tags can be used to detect tagged proteins in both live and fixed cells. Green fluorescent protein (GFP) is one of the most widely used protein tags under this category. GFP is a protein isolated from the jellyfish Aequorea victoria that exhibits bright green fluorescence that does not fade easily when exposed to blue or ultraviolet (UV) light.