Haplogroup P (mtDNA)

Haplogroup P
Haplogroup P
Possible time of origin	50,000 years
Possible place of origin	Southeast Asia
Ancestor	R
Descendants	16176, P3, P4, P5, P6, P7, P9
Defining mutations	15607

In human mitochondrial genetics, Haplogroup P is a human mitochondrial DNA (mtDNA) haplogroup.

Origin

Haplogroup P is a descendant of Haplogroup R.

Distribution

Today, P is most commonly found in Oceania, especially in Papuans, Melanesians, indigenous Australians,^[3] It's 1.4% in mainstream Filipinos but 1.13% in Luzon, 1.78% in Visayas, 1.43% in Mindanao.^[4] It is much higher in Sub-Filipinos groups, 6.67% in Bugkalot and 11.2% in Maranao.^[5] It was found in the Philippines Negrito Aeta of Bataan at 40%.^[6] It is also found in the Malaysians at 0.9%, including Indonesians.

Subclades

Tree

This phylogenetic tree of haplogroup P subclades is based on the paper by Mannis van Oven and Manfred Kayser Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation^[2] and subsequent published research.

P
- P-C16176T
  - P1
    - P1d
      - P1d1
        P1d1a
      - P1d2
        P1d2a
    - P1-T152C!
      - P1f
  - P2'10
    - P2
    - P10
  - P8
- P3
  - P3a
  - P3b
    - P3b1
- P4
  - P4a
    - P4a1
  - P4b
    - P4b1
- P5
- P6
- P7
- P9
  - P9a

References

^ Hudjashov, Georgi et al. 2007. Revealing the prehistoric settlement of Australia by Y chromosome and mtDNA analysis. Archived 2012-08-17 at the Wayback Machine PNAS May 22, 2007 vol. 104 no. 21 8726-8730
^ ^a ^b van Oven, Mannis; Manfred Kayser (13 Oct 2008). "Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation". Human Mutation. 30 (2): E386 – E394. doi:10.1002/humu.20921. PMID 18853457. S2CID 27566749.
^ Friedlaender et al. 2005 April, Expanding Southwest Pacific Mitochondrial Haplogroups P and Q, 22 (6): 1506
^ Philippine Mitochondrial DNA Diversity: A Populated Viaduct between Taiwan and Indonesia?, by Kristina A. Tabbada, https://www.researchgate.net/publication/26813491_Philippine_Mitochondrial_DNA_Diversity_A_Populated_Viaduct_between_Taiwan_and_Indonesia
^ Complete mtDNA genomes of Filipino ethnolinguistic groups: A melting pot of recent and ancient lineages in the Asia-Pacific region, by Catherine Hill, A Mitochondrial Stratigraphy for Island Southeast Asia
^ Delfin F. et al 2013. Complete mtDNA genomes of Filipino ethnolinguistic groups: a melting pot of recent and ancient lineages in the Asia-Pacific region. Eur J Hum Genet. 2013 Jun 12. doi: 10.1038/ejhg.2013.122.

External links

General
- Mannis van Oven's Phylotree
Haplogroup P
- Ian Logan's Mitochondrial DNA Site: Haplogroup P
- Expanding Southwest Pacific Mitochondrial Haplogroups P and Q

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[1] Hudjashov, Georgi et al. 2007. Revealing the prehistoric settlement of Australia by Y chromosome and mtDNA analysis. Archived 2012-08-17 at the Wayback Machine PNAS May 22, 2007 vol. 104 no. 21 8726-8730

[vanOven-2] van Oven, Mannis; Manfred Kayser (13 Oct 2008). "Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation". Human Mutation. 30 (2): E386 – E394. doi:10.1002/humu.20921. PMID 18853457. S2CID 27566749.

[Friedlaender-3] Friedlaender et al. 2005 April, Expanding Southwest Pacific Mitochondrial Haplogroups P and Q, 22 (6): 1506

[4] Philippine Mitochondrial DNA Diversity: A Populated Viaduct between Taiwan and Indonesia?, by Kristina A. Tabbada, https://www.researchgate.net/publication/26813491_Philippine_Mitochondrial_DNA_Diversity_A_Populated_Viaduct_between_Taiwan_and_Indonesia

[5] Complete mtDNA genomes of Filipino ethnolinguistic groups: A melting pot of recent and ancient lineages in the Asia-Pacific region, by Catherine Hill, A Mitochondrial Stratigraphy for Island Southeast Asia

[6] Delfin F. et al 2013. Complete mtDNA genomes of Filipino ethnolinguistic groups: a melting pot of recent and ancient lineages in the Asia-Pacific region. Eur J Hum Genet. 2013 Jun 12. doi: 10.1038/ejhg.2013.122.

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