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Visualization for the BioPhi codebase #74

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This PR contains mermaid visualization of the BioPhi codeabse. You can see how the markdowns render in GitHub here:
https://github.com/CodeBoarding/GeneratedOnBoardings/blob/main/BioPhi/on_boarding.md

Me and my friend are working on generating this diagrams using Static Analysis and LLMs. We do this diagram driven documentation as we believe this is the fastest for a person to get up-to-speed with an existing codebase.

I would love to hear what is your opinion on the diagrams generated for BioPhi, further it would be awesome to hear what is your current on-boarding process for introducing people to new codebases and if we can help in some shape or form to improve that!

Any feedback is more than welocme!

Full disclosure: we're trying to turn this into a startup, but we're still in a very early stage and figuring out what will actually be useful for people.

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