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Description
Importing the newly generated bladderpdo dataset from figshare (generated and deposited via #359) the resulting Dataset.transcriptomics
does not have the correct column names.
Expected behavior:
>>> bladderpdo = coderdata.load(name='bladderpdo')
>>> bladderpdo.transcriptomics.columns
Index(['entrez_id', 'improve_sample_id', 'transcriptomics', 'source', 'study'], dtype='object')
Observed behavior
>>> bladderpdo = coderdata.load(name='bladderpdo')
>>> bladderpdo.transcriptomics.columns
Index(['entrez_id', 'value', 'improve_sample_id', 'source', 'study'], dtype='object')
As you can see the column transcriptomics
currently is called value
.
This should be an easy fix, but currently breaks all existing downstream processing for the bladderpdo
dataset
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