Repositories list

• ncomms2025

  Public
  AI-driven fusion of neurological work-up for assessment of biological Alzheimer's disease

  Python

  •

  GNU Affero General Public License v3.0

  •0•0•0•0•Updated Jun 17, 2025Jun 17, 2025

• icml2025

  Public
  Active feature acquisition via explainability-driven ranking

  Python

  •

  MIT License

  •1•2•0•0•Updated Jun 11, 2025Jun 11, 2025

• vkola-lab.github.io

  Public
  Kolachalama laboratory

  SCSS

  •79•2•0•1•Updated Jun 7, 2025Jun 7, 2025

• nmed2024

  Public
  AI-based differential diagnosis of dementia etiologies on multimodal data

  Python

  •

  GNU Affero General Public License v3.0

  •15•89•0•0•Updated May 21, 2025May 21, 2025

• PodGPT

  Public
  PodGPT: An audio-augmented large language model for research and education

  Python

  •

  GNU Affero General Public License v3.0

  •1•40•0•0•Updated Apr 26, 2025Apr 26, 2025

• llm-simple-benchmark

  Public
  A simple setup to evaluate LLMs, built using vLLM and OmegaConf.

  Python

  •

  MIT License

  •0•0•0•0•Updated Apr 21, 2025Apr 21, 2025

• jad2024

  Public
  Global amyloid burden enhances network efficiency of tau propagation in the brain

  Jupyter Notebook

  •

  MIT License

  •1•1•0•0•Updated Mar 24, 2025Mar 24, 2025

• jad2023

  Public
  Fusion of low-level descriptors of digital voice recordings for dementia assessment

  Python

  •

  MIT License

  •0•1•0•0•Updated Jan 24, 2025Jan 24, 2025

• vkola-lab-docs

  Public
  Knowledge base for the Kolachalama lab

  TeX

  •

  MIT License

  •4•1•0•1•Updated Jan 21, 2025Jan 21, 2025

• kir2024

  Public
  A web-based tool for real-time adequacy assessment of kidney biopsies

  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated Dec 27, 2024Dec 27, 2024

• tmi2024

  Public
  Graph attention-based fusion of pathology images and gene expression for prediction of cancer survival

  Python

  •

  MIT License

  •2•12•4•0•Updated Dec 11, 2024Dec 11, 2024

• ML4H

  Public
  Machine learning for healthcare (ML4H)

  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated Nov 17, 2024Nov 17, 2024

• DREAMER

  Public
  DREAMER: Data REAdiness for MachinE learning Research

  Python

  •

  MIT License

  •3•0•0•0•Updated Aug 23, 2024Aug 23, 2024

• access2024

  Public
  Adversarial learning for MRI reconstruction and classification of cognitively impaired individuals

  Python

  •

  MIT License

  •0•2•0•0•Updated Jul 8, 2024Jul 8, 2024

• tmi2022

  Public
  A graph-transformer for whole slide image classification

  Python

  •

  MIT License

  •36•166•3•0•Updated Jun 17, 2024Jun 17, 2024

• ajpa2024

  Public
  Graph perceiver network for lung tumor and premalignant lesion stratification from histopathology

  Jupyter Notebook

  •1•1•0•0•Updated Jun 5, 2024Jun 5, 2024

• unaah

  Public
  U-Net-and-a-half

  Python

  •

  MIT License

  •0•2•1•0•Updated Jun 4, 2024Jun 4, 2024

• hbm2024

  Public
  Disease-driven domain generalization for neuroimaging-based assessment of Alzheimer's disease

  Python

  •

  MIT License

  •1•4•0•0•Updated Jun 4, 2024Jun 4, 2024

• skra2024

  Public
  Survival analysis on subchondral bone length for total knee replacement

  Jupyter Notebook

  •0•1•0•0•Updated Feb 23, 2024Feb 23, 2024

• iscience2023

  Public
  Deep learning for risk-based stratification of cognitively impaired individuals

  Python

  •

  Other

  •2•1•0•0•Updated Aug 3, 2023Aug 3, 2023

• brain2020

  Public
  Development and validation of an interpretable deep learning framework for Alzheimer's disease classification

  Python

  •

  MIT License

  •55•168•0•0•Updated Jul 11, 2023Jul 11, 2023

• azrt2021

  Public
  Detection of dementia on voice recordings using deep learning: a Framingham Heart Study

  Python

  •

  MIT License

  •4•11•0•4•Updated Jul 6, 2023Jul 6, 2023

• ncomms2022

  Public
  Multimodal deep learning for Alzheimer's disease dementia assessment

  Python

  •

  MIT License

  •28•120•0•0•Updated May 6, 2023May 6, 2023

• peds2019

  Public
  Quantifying the nativeness of antibody sequences using long short-term memory networks

  Python

  •

  MIT License

  •7•17•1•0•Updated Dec 17, 2021Dec 17, 2021

• azrt2020

  Public
  Enhancing magnetic resonance imaging driven Alzheimer’s disease classification performance using generative adversarial learning

  Python

  •

  MIT License

  •11•23•0•0•Updated Dec 16, 2021Dec 16, 2021

• multi-GPU

  Public
  Python

  •

  MIT License

  •0•0•0•0•Updated Dec 14, 2021Dec 14, 2021

• ajpa2021

  Public
  Deep learning driven quantification of interstitial fibrosis in kidney biopsies

  Python

  •

  MIT License

  •0•3•0•0•Updated Oct 22, 2021Oct 22, 2021

• ar2021

  Public
  Subchondral bone length in knee osteoarthritis: A deep learning driven imaging measure and its association with radiographic and clinical outcomes

  Python

  •

  MIT License

  •3•1•0•0•Updated May 25, 2021May 25, 2021

• er2020

  Public
  Assessment of knee pain from MR imaging using a convolutional Siamese network

  Python

  •

  MIT License

  •4•4•0•0•Updated May 20, 2021May 20, 2021

• python_speech_features_cuda

  Public
  This is a re-implementation of "Python Speech Features" that offers up to hundreds of times performance boost on CUDA enabled GPUs.

  Python

  •

  MIT License

  •0•8•0•0•Updated Apr 28, 2021Apr 28, 2021