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@sriram-lab

Systems Biology at University of Michigan

Machine learning and constraint-based modeling software from the Chandrasekaran Lab

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  1. MetOncoFit MetOncoFit Public

    Common biochemical and topological attributes of metabolic genes recurrently dysregulated in tumors.

    HTML 1 6

  2. astrix astrix Public

    Using gene expression data to identify regulatory interactions between transcription factors and target genes.

    MATLAB

  3. egem egem Public

    epigenome scale metabolic modeling for cancer metabolism

    MATLAB 4 2

  4. dfa dfa Public

    Fitting time-course metabolomics onto genome-scale metabolic models for inferring metabolic activity.

    MATLAB 1 1

  5. MAGENTA MAGENTA Public

    Metabolism And GENomics-based Tailoring of Antibiotic regimens: predicts the impact of pathogen environment on antibiotic potency based on chemogenomic data.

    C++ 1 1

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