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markovian-dynamics

Here are 6 public repositories matching this topic...

danieljsharpe / DISCOTRESS

🦜 DISCOTRESS 🦜 is a software package to simulate and analyse the dynamics on arbitrary Markov chains

markov-model simulation markov-chain kinetic-monte-carlo markov-chains stochastic-processes stochastic-simulation-algorithm markov-process random-walk ctmc enhanced-sampling stochastic-simulation dtmc network-dynamics rare-events k-shortest-paths markovian-dynamics continuous-time-markov-chain simulation-algorithms

Updated Jul 29, 2021
C++

Edric-Matwiejew / QSW_MPI

QSW_MPI is a python package developed for MPI-parallelised time-series simulation of continuous-time quantum stochastic walks. This model allows for the study of Markovian open quantum systems in the Lindblad formalism, including a generalization of the continuous-time random walk and continuous-time quantum walk.

python fortran mpi matrix-exponentiation markovian-dynamics quantum-walk quantum-stochastic-walk open-quantum-walk lindblad-master-equation parallel-computation

Updated Dec 23, 2022
Fortran

danieljsharpe / DISCOTRESS_tutorials

Learn to get started using DISCOTRESS with these tutorials! Then apply to your own Markov chains in ecology 🦜🌴 economics 💸📈 biophysics 🧬🦠 and more!

markov-model simulation markov-chain tutorials kinetic-monte-carlo markov-decision-processes stochastic-simulation-algorithm markov-process random-walk ctmc discrete-event-simulation stochastic-simulation dtmc network-dynamics rare-events markovian-dynamics markov-decision-process stochastic-dynamics

Updated Sep 12, 2021
Brainfuck

amitg7 / markovian-dynamics

Markovian-dynamics is a Python package built to simplify dynamics calculations in thermodynamic systems.

physics thermodynamics non-equilibrium master-equation markovian-dynamics rate-matrix detailed-balance arrhenius-process

Updated Apr 13, 2019
Python

danieljsharpe / DISCOTRESS_tools

Various scripts for analysis of the dynamics on Markov chains, and processing DISCOTRESS output

markov-model markov-chain stochastic-processes network-dynamics continuous-time-random-walk discrete-state-stochastic-processes markovian-dynamics continuous-time-markov-chain

Updated May 26, 2021
Python

danieljsharpe / k_distinct_paths

Python code to find the k shortest paths in a kinetic network (Markov chain)

markov-model shortest-paths k-shortest-paths markovian-dynamics

Updated Jul 24, 2019
Python

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