1 sudo ls -l /root

2 sudo whoami
3 sudo su –
4 sudo su
5 exit
6 sudo userdel itbuser
7 sudo userdel –remove-home itbuser
8 sudo userdel –remove-home itbuser -f
9 sudo userdel –remove-home -f itbuser
10 exit
11 mongo
12 history
13 sudo -u postgres psql
14 exit
15 awk
16 gawk
17 sudo apt install gawk
18 sudo apt update
19 sudo apt install apache2
20 sudo apt install mysql-server
21 sudo mysql
22 mysql -uroot -p
23 sudo mysql -u root -p
24 sudo apt install php libapache2-mod-php
25 php -v
26 sudo nano /var/www/html/misitioweb/index.html
27 sudo chmod 777 test
28 exit
29 cd ..
30 chmod 777 html
31 sudo chmod 777 html
32 exit
33 sudo snap install emacs --classic
34 sudo apt update
35 sudo apt install mysql-workbench-community
36 snap install mysql-workbench-community
37 mysql -uroot -p
38 sudo mysql -u student -p
39 nano /etc/mysql/my. cnf
40 sudo adduser student vboxsf
41 exit
42 sudo mysql -u root -p
43 exit
44 sudo apt-get --purge remove mysql-client mysql-server mysql-common
45 sudo apt-get autoremove
46 sudo rm -rf /etc/mysql/
47 mongo
48 sudo -u postgres psql
49 mysql -uroot -p
50 sudo wget -c https://repo.mysql.com//mysql-apt-config_0.8.13-1_all.deb
51 sudo dpkg -i mysql-apt-config_0.8.13-1_all.deb
52 sudo apt update
53 sudo apt-get install mysql-server
54 sudo mysql -u root -p
55 sudo apt-get update
56 sudo apt install mysql-workbench
57 exit
58 sudo mysql -u root -p
59 sudo apt-get remove mysql-workbench-community
 60 sudo dpkg -r mysql-workbench-community
61 sudo rpm -e mysql-workbench-community
62 snap connect mysql-workbench-community:password-manager-service
63 snap connect mysql-workbench-community:ssh-keys
64 sudo mysql -u root -p
65 sudo mysql -u student -p
66 exit
67 sudo adduser joan vboxsf
68 sudo adduser student vboxsf
69 exit
70 gawk '{print $3}' refGeneHuman.txt |sort|uniq | grep -v "_" | grep -v
"chrM" | grep -v "chrom" | wc -l
71 gawk '{print $13}' refGeneHuman.txt |sort|uniq | wc -l
72 gawk '{print $2}' refGeneHuman.txt |sort|uniq |wc -l
73 exit
74 sudo service mysql restart
75 wget -e robots=off -r http://hgdownload.soe.ucsc.edu/admmin/exe/linux.x86_64
76 wget -e robots=off -r http://hgdownload.soe.ucsc.edu/admin/exe/linux.x86_64
77 exit
78 dpkg -l | grep postgres
79 apt-get remove postgresql*
80 sudo apt-get remove postgresql*
81 rm -r /etc/postgresql/
82 sudo rm -r /etc/postgresql/
83 sudo rm -r /var/lib/postgresql/
84 sudo userdel -r postgres
85 exit
86 sudo -u postgres psql
87 exit
88 sudo mysql -u student -p
89 exit
90 sudo nano /etc/mysql/mysql.conf.d/mysqld.cnf
91 systemctl start mysql
92 mysql -u root -p
93 mysql --local-infile=1 -u student -p
94 exit
95 sudo chmod 777 /var/www/html/ShowGenes
96 chmod 777 /var/www/html/ShowGenes/ProcessGene.php
97 chmod 777 /var/www/html/
98 chmod 777 /var/www/html
99 sudo chmod 777 /var/www/html/
100 sudo chmod 777 /var/www/html/ShowGenes/ProcessGene.php
101 aptitude search php7
102 sudo apt install aptitude
103 aptitude install php7.1-mysql
104 sudo aptitude install php7.1-mysql
105 sudo aptitude install php7.4.3-mysql
106 sudo apt install php libapache2-mod-php php-mysql
107 sudo systemctl reload apache2
108 exit
109 sudo mysql -u student -p
110 mysql --local-infile=1 -u student -p
111 exit
112 mkdir PEC1_3
113 exit
114 geneid -P ../param/human3iso.param test.fa
115 exit
116 x-special/nautilus-clipboard
117 copy
 118 file:///home/student/Work/geneid/PEC1_3/test.fa
119 ../bin/geneid -P ../param/human3iso.param test.fa
120 exit
121 ../bin/geneid -P ../param/human3iso.param test.fa
122 exit
123 cd Work/geneid
124 ls
125 bin/geneid -P param/human3iso.param samples/test.fa
126 make
127 sudo apt install make
128 make
129 bin/geneid -P param/human3iso.param samples/test.fa
130 bin/geneid -h
131 cd ..
132 ls
133 cd..
134 exit
135 gzip -d geneid_v1.1.Feb_26_2003.tar.gz
136 tar -xvf geneid_v1.1.Feb_26_2003.tar
137 cd geneid
138 make
139 gcc
140 sudo apt install gcc
141 make
142 exit
143 geneid -h
144 geneid
145 exit
146 gzip -d geneid_v1.0.Linux.Sep_08_2000.tar.gz
147 tar -xvf geneid_v1.0.Linux.Sep_08_2000.tar
148 ls
149 cd geneid_v1.0.Linux/
150 make
151 cd ..
152 exit
153 bin/geneid -P param/human3iso.param samples/test.fa
154 exit
155 bin/geneid -P param/human3iso.param samples/test.fa
156 exit
157 bin/geneid -P param/human3iso.param samples/test.fa | grep -v "\#" | grep "
test1" | gawk 'BEGIN {OFS = "\t"; print "track name=HIB_geneid_predicction32020"}
{print "chr8", $3+63038806, $2+63038806, "HIB_GEN"}'
158 exit
159 make
160 bin/geneid -P param/human3iso.param samples/test.fa
161 exit
162 gzip -d geneid-1.4.5.tar.gz
163 tar -xvf geneid-1.4.5.tar
164 exit
165 sudo apt-get update
166 sudo apt-get install sed
167 sed
168 echo "Bienvenidos al Mundo de los Bits y los Bytes" | sed 's/\(\b[A-Z]\)/\(\
1\)/g'
169 exit
170 sed '1 s/jose/pepe/' sedtest.txt
171 exit
172 echo "Bienvenidos al Mundo de los Bits y los Bytes" | sed 's/\(\b[A-Z]\)/\(\
1\)/g'
 173 echo "Bienvenidos al Mundo de los Bits y los Bytes" | sed 's/\(\[A-Z]\)/\(\
1\)/g'
174 echo "Bienvenidos al Mundo de los Bits y los Bytes" | sed 's/\(\a[A-Z]\)/\(\
1\)/g'
175 echo "Bienvenidos al Mundo de los Bits y los Bytes" | sed 's/\(\ba[A-Z]\)/\
(\1\)/g'
176 echo "Bienvenidos al Mundo de los Bits y los Bytes" | sed 's/\(\b[A-Z]\)/\(\
1\)/g'
177 echo "Bienvenidos Al Mundo de los Bits y los Bytes" | sed 's/\(\b[A-Z]\)/\(\
1\)/g'
178 sed '1 s/jose/pepe/' sedtest.txt
179 sed '21 s/no/si/' sedtest.txt
180 sed '2 s/no/si/' sedtest.txt
181 sed '3 s/no/si/' sedtest.txt
182 exti
183 exit
184 id -nG
185 docker info
186 docker run hello-world
187 docker search ubuntu
188 docker images
189 docker run -it ubuntu
190 docker ps
191 docker ps -a
192 docker ps -l
193 docker start 79ccbe6c9a76
194 docker ps
195 docker stop serene_ganguly
196 docker ps
197 docker run serene_ganguly
198 docker run -it serene_ganguly
199 docker run
200 docker run IMAGE 79ccbe6c9a76
201 docker ps -a
202 docker run ubuntu IMAGE 79ccbe6c9a76
203 docker run ubuntu
204 docker ps -a
205 docker run -it ubuntu
206 docker ps -a
207 docker image rm great_ishizaka
208 docker rm great_ishizaka
209 docker ps -a
210 docker rm goofy_varahamihira
211 docker rm serene_visvesvaraya
212 docker rm serene_ganguly
213 docker ps -a
214 exit
215 sudo apt update
216 sudo apt install apt-transport-https ca-certificates curl software-
properties-common
217 curl -fsSL https://download.docker.com/linux/ubuntu/gpg | sudo apt-key add -
218 sudo add-apt-repository "deb [arch=amd64]
https://download.docker.com/linux/ubuntu focal stable"
219 sudo apt update
220 apt-cache policy docker-ce
221 sudo apt install docker-ce
222 sudo systemctl status docker
223 sudo docker
224 sudo usermod -aG docker ${USER}
225 sudo student -aG docker ${USER}
226 docker
227 su - ${USER}
228 exit
229 locale
230 sudo nano /etc/locale.gen
231 exit
232 exit
233 sudo nano /etc/locale.gen
234 doc
235 exit
236 locale
237 exit
238 sudo apt update
239 exit
240 docker
241 sudo nano /etc/mysql/conf.d/mysql.cnf
242 sudo nano /etc/mysql/mysql.conf.d/mysqld.cnf
243 exit
244 locale
245 exit
246 sudo mysql -u student -p
247 exit
248 doc
249 exit
250 sudo nano /etc/locale.gen
251 exit
252 uname -a
253 cd /bin
254 ls -lha
255 vi sl
256 vi ls
257 ls /usr/bin | sort -f | less
258 ls date
259 date
260 !
261 date
262 pwd
263 cd .
264 ls .
265 pwd
266 cd /
267 pwd
268 find . -name docker 2>/dev/null
269 sudo vi /dev/null
270 cd /home
271 ls
272 cd student/
273 ls
274 cd Do
275 cd Downloads/
276 ls
277 ls -lha
278 touch test.txt | 123 >>test.txt
279 touch test.txt | 123>>test.txt
280 touch test2.txt | 123>>test.txt
281 less test2.txt
282 less test.txt
283 123>>test2.txt
284 less test2.txt
285 vi test2.txt
286 2>test2.txt
287 vi test2.txt
288 2 > test2.txt
289 '222' > test2.txt
290 '222'>test2.txt
291 222>test2.txt
292 vi test2.txt
293 history > history.txt